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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
15448 and 15449 are separated by 161 nucleotides
15449 and 15450 are separated by 112 nucleotides
15450 and 15451 are separated by 7 nucleotides
15451 and 15452 are separated by 149 nucleotides
mRNA_7080: 15448 - K12481 RBSN, ZFYVE20 rabenosyn-5, at 834,064 to 836,328
15448
mRNA_7081: 15449 - K00272 DDO D-aspartate oxidase, at 836,490 to 837,896
15449
mRNA_7082: 15450 - K20406 NPRL3 nitrogen permease regulator 3-like protein, at 838,009 to 840,569
15450
mRNA_7083: 15451 - K18803 HPM1 protein-histidine N-methyltransferase, at 840,577 to 841,991
15451
mRNA_7084: 15452 - KOG1575 Voltage-gated shaker-like K+ channel, subunit beta/KCNAB, at 842,141 to 843,806
15452
Group
Condition
mRNA
_7080
mRNA
_7081
mRNA
_7082
mRNA
_7083
mRNA
_7084
15448
15449
15450
15451
15452
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-1.5
-0.8
-0.6
-2.8
+0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-1.7
-0.3
-1.1
-1.5
+0.2
auxotrophy
YNB Glucose 75mM Methionine
-2.8
+0.5
-1.1
-0.9
-0.0
facs on lipid accumulation
Sorted No BODIPY Gate
-0.9
-0.9
-0.2
-2.1
+0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
-1.5
-0.6
-0.4
-1.2
+0.3
ypd buoyancy
40 hrs No Buoyancy Separation
-1.1
-1.3
-0.4
+0.1
-0.4
buoyancy on lipid accumulation
40 hrs High Buoyancy
-1.2
-0.7
-0.4
-0.3
-0.1
growth on oleic acid
YNB Glucose
-2.6
+0.2
+0.2
+0.4
-0.2
facs on lipid accumulation
Sorted High BODIPY Gate
-0.9
-0.1
-1.3
+0.2
+0.2
auxotrophy
YNB Glucose 75mM Arginine
-1.1
+0.2
-0.3
-0.4
-0.1
auxotrophy
Dropout Complete
-0.9
-0.0
-0.6
-0.3
+0.3
growth on ypd
YPD
+0.7
-0.2
-0.1
-1.8
+0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.5
-0.1
+0.2
-0.6
+0.1
ypd buoyancy
40 hrs Low Buoyancy
-0.4
+0.3
+0.0
-0.6
-0.2
auxotrophy
YNB Glucose
-0.6
+0.3
-0.5
-0.1
+0.4
growth on ricinoleic acid
YNB Glucose
-0.1
-0.3
+0.3
-0.2
-0.2
ypd buoyancy
40 hrs Median Buoyancy
-0.5
-0.0
-0.2
+0.4
+0.0
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.3
+0.1
+0.0
+1.1
-0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.3
-0.3
+0.4
+0.9
-0.1
ypd buoyancy
40 hrs High Buoyancy
-0.1
+0.3
-0.4
+0.7
+0.4
growth on oleic acid
YNB Oleic Acid
-0.2
+0.4
-0.4
+1.3
-0.1
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