Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
15449 and 15450 are separated by 112 nucleotides
15450 and 15451 are separated by 7 nucleotides
15451 and 15452 are separated by 149 nucleotides
15452 and 15453 are separated by 164 nucleotides
mRNA_7081: 15449 - K00272 DDO D-aspartate oxidase, at 836,490 to 837,896
15449
mRNA_7082: 15450 - K20406 NPRL3 nitrogen permease regulator 3-like protein, at 838,009 to 840,569
15450
mRNA_7083: 15451 - K18803 HPM1 protein-histidine N-methyltransferase, at 840,577 to 841,991
15451
mRNA_7084: 15452 - KOG1575 Voltage-gated shaker-like K+ channel, subunit beta/KCNAB, at 842,141 to 843,806
15452
mRNA_7085: 15453 - HMMPfam-TRF2-interacting telomeric protein/Rap1 - C terminal domain-PF11626,SUPERFAMILY--SSF46689, at 843,971 to 847,409
15453
Group
Condition
mRNA
_7081
mRNA
_7082
mRNA
_7083
mRNA
_7084
mRNA
_7085
15449
15450
15451
15452
15453
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.8
-0.6
-2.8
+0.1
-0.2
facs on lipid accumulation
Sorted No BODIPY Gate
-0.9
-0.2
-2.1
+0.1
-1.1
ypd buoyancy
40 hrs No Buoyancy Separation
-1.3
-0.4
+0.1
-0.4
-1.5
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.6
-0.4
-1.2
+0.3
-0.8
auxotrophy
Dropout Complete
-0.0
-0.6
-0.3
+0.3
-1.7
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.3
-1.1
-1.5
+0.2
+0.6
facs on lipid accumulation
Sorted High BODIPY Gate
-0.1
-1.3
+0.2
+0.2
-0.9
growth on ricinoleic acid
YNB Glucose
-0.3
+0.3
-0.2
-0.2
-1.0
auxotrophy
YNB Glucose 75mM Methionine
+0.5
-1.1
-0.9
-0.0
+0.2
auxotrophy
YNB Glucose 75mM Arginine
+0.2
-0.3
-0.4
-0.1
-0.3
auxotrophy
YNB Glucose
+0.3
-0.5
-0.1
+0.4
-0.7
ypd buoyancy
40 hrs Low Buoyancy
+0.3
+0.0
-0.6
-0.2
-0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.7
-0.4
-0.3
-0.1
+1.1
growth on oleic acid
YNB Glucose
+0.2
+0.2
+0.4
-0.2
-0.6
ypd buoyancy
40 hrs Median Buoyancy
-0.0
-0.2
+0.4
+0.0
+0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.3
+0.4
+0.9
-0.1
-0.4
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.1
+0.2
-0.6
+0.1
+0.9
growth on ypd
YPD
-0.2
-0.1
-1.8
+0.2
+2.6
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.1
+0.0
+1.1
-0.2
-0.2
ypd buoyancy
40 hrs High Buoyancy
+0.3
-0.4
+0.7
+0.4
+0.3
growth on oleic acid
YNB Oleic Acid
+0.4
-0.4
+1.3
-0.1
+0.8
remove
mRNA_7081
plot
remove
mRNA_7082
plot
remove
mRNA_7083
remove
mRNA_7084
plot
remove
mRNA_7085
plot