Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 15453 and 15454 are separated by 146 nucleotides15454 and 15455 are separated by 38 nucleotides15455 and 15456 are separated by 790 nucleotides15456 and 15457 are separated by 2163 nucleotides mRNA_7085: 15453 - HMMPfam-TRF2-interacting telomeric protein/Rap1 - C terminal domain-PF11626,SUPERFAMILY--SSF46689, at 843,971 to 847,409 15453 mRNA_7086: 15454 - HMMPfam-Shugoshin C terminus-PF07557, at 847,556 to 851,531 15454 mRNA_7087: 15455 - Hypothetical Protein, at 851,570 to 853,119 15455 mRNA_7088: 15456 - K10739 RFA2, RPA2 replication factor A2, at 853,910 to 855,078 15456 mRNA_7089: 15457 - Hypothetical Protein, at 857,242 to 857,760 15457
Group Condition mRNA_7085 mRNA_7086 mRNA_7087 mRNA_7088 mRNA_7089
15453 15454 15455 15456 15457
ypd buoyancy 40 hrs No Buoyancy Separation -1.5 -0.7 -3.0 N.D. -1.1
auxotrophy Dropout Complete -1.7 +0.1 +0.2 N.D. -0.5
facs on lipid accumulation Sorted No BODIPY Gate -1.1 +0.1 +0.6 N.D. -1.3
growth on oleic acid YNB Glucose -0.6 -0.1 +0.0 N.D. -0.5
growth on ricinoleic acid YNB Ricinoleic Acid -0.4 +0.1 -0.6 N.D. -0.1
facs on lipid accumulation Sorted Low BODIPY Gate -0.8 -0.0 +0.7 N.D. -0.5
auxotrophy YNB Glucose 75mM Methionine +0.2 -0.0 -0.3 N.D. -0.4
facs on lipid accumulation Sorted High BODIPY Gate -0.9 -0.3 +0.8 N.D. -0.0
growth on ricinoleic acid YNB Glucose -1.0 -0.1 +0.3 N.D. +0.5
ypd buoyancy 40 hrs Low Buoyancy -0.2 -0.2 -0.1 N.D. +0.2
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2 +0.2 -0.1 N.D. -0.0
growth on oleic acid YNB Oleic Acid +0.8 -0.3 -0.1 N.D. -0.6
auxotrophy YNB Glucose -0.7 +0.2 +0.1 N.D. +0.5
auxotrophy YNB Glucose 75mM Arginine -0.3 +0.2 +0.4 N.D. +0.0
ypd buoyancy 40 hrs High Buoyancy +0.3 -0.3 +0.1 N.D. +0.2
ypd buoyancy 40 hrs Median Buoyancy +0.2 -0.1 +0.2 N.D. +0.7
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2 -0.5 +0.8 N.D. +0.9
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.6 -0.8 +0.6 N.D. +0.6
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.9 -0.3 +1.1 N.D. +0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy +1.1 -0.7 +1.0 N.D. +0.9
growth on ypd YPD +2.6 +0.0 +0.7 N.D. -0.2
remove
mRNA_7085
plot
remove
mRNA_7086
plot
remove
mRNA_7087
remove
mRNA_7088
plot
remove
mRNA_7089
plot