Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 15456 and 15457 are separated by 2163 nucleotides15457 and 15458 are separated by 198 nucleotides15458 and 15459 are separated by 305 nucleotides15459 and 15460 are separated by 336 nucleotides mRNA_7088: 15456 - K10739 RFA2, RPA2 replication factor A2, at 853,910 to 855,078 15456 mRNA_7089: 15457 - Hypothetical Protein, at 857,242 to 857,760 15457 mRNA_7090: 15458 - Hypothetical Protein, at 857,959 to 859,367 15458 mRNA_7091: 15459 - ProSitePatterns-Zinc finger C2H2 type domain signature.-PS00028,ProSiteProfiles-Zinc finger C2H2 type domain profile.-PS50157, at 859,673 to 862,971 15459 mRNA_7092: 15460 - KOG2545 Conserved membrane protein, at 863,308 to 866,540 15460
Group Condition mRNA_7088 mRNA_7089 mRNA_7090 mRNA_7091 mRNA_7092
15456 15457 15458 15459 15460
ypd buoyancy 40 hrs No Buoyancy Separation N.D. -1.1 -0.9 +0.1 -0.7
facs on lipid accumulation Sorted No BODIPY Gate N.D. -1.3 -0.4 -0.1 -0.6
facs on lipid accumulation Sorted Low BODIPY Gate N.D. -0.5 -0.4 -0.1 -0.2
auxotrophy YNB Glucose 75mM Methionine N.D. -0.4 -0.3 -0.2 -0.2
growth on oleic acid YNB Oleic Acid N.D. -0.6 -0.1 -0.3 +0.2
auxotrophy Dropout Complete N.D. -0.5 -0.1 -0.2 +0.2
auxotrophy YNB Glucose 75mM Arginine N.D. +0.0 -0.3 -0.2 -0.1
growth on oleic acid YNB Glucose N.D. -0.5 +0.2 -0.2 +0.2
growth on ypd YPD N.D. -0.2 +0.0 +0.2 -0.3
growth on ricinoleic acid YNB Ricinoleic Acid N.D. -0.1 +0.4 -0.2 -0.2
ypd buoyancy 40 hrs High Buoyancy N.D. +0.2 -0.5 +0.2 +0.1
ypd buoyancy 40 hrs Low Buoyancy N.D. +0.2 -0.1 +0.1 -0.1
auxotrophy YNB Glucose N.D. +0.5 -0.3 -0.2 +0.1
facs on lipid accumulation Sorted High BODIPY Gate N.D. -0.0 +0.2 -0.0 +0.0
growth on ricinoleic acid YNB Glucose N.D. +0.5 +0.2 -0.2 -0.1
ypd buoyancy 40 hrs Median Buoyancy N.D. +0.7 -0.2 +0.0 -0.0
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. -0.0 +0.4 -0.0 +0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. +0.6 +0.3 +0.0 +0.5
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. +0.3 +0.6 +0.1 +0.5
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. +0.9 +0.6 -0.1 +0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. +0.9 +0.9 -0.0 +0.5
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