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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
15468 and 15469 are separated by 97 nucleotides
15469 and 15470 are separated by 454 nucleotides
15470 and 15471 are separated by 1249 nucleotides
15471 and 15472 are separated by 552 nucleotides
mRNA_7100: 15468 - BLAST putative protein [Melanopsichium pennsylvanicum 4], at 880,881 to 881,621
15468
mRNA_7101: 15469 - K08968 E1.8.4.14 L-methionine (R)-S-oxide reductase, at 881,719 to 882,426
15469
mRNA_7102: 15470 - K03441 GLP-F aquaglyceroporin related protein, other eukaryote, at 882,881 to 885,755
15470
mRNA_7103: 15471 - Hypothetical Protein, at 887,005 to 887,880
15471
mRNA_7104: 15472 - K09448 TEAD transcriptional enhancer factor, at 888,433 to 891,786
15472
Group
Condition
mRNA
_7100
mRNA
_7101
mRNA
_7102
mRNA
_7103
mRNA
_7104
15468
15469
15470
15471
15472
ypd buoyancy
40 hrs No Buoyancy Separation
-0.4
-0.0
+0.2
-2.7
-0.5
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.4
+0.2
-0.4
-3.5
+0.4
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.9
-0.4
-0.3
-1.8
-0.3
growth on ypd
YPD
-0.4
-0.0
-0.1
-1.6
+0.2
facs on lipid accumulation
Sorted No BODIPY Gate
+0.4
-0.1
+0.1
-1.5
+0.4
auxotrophy
YNB Glucose 75mM Methionine
-0.3
-0.2
+0.1
-0.4
+0.6
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.2
+0.2
-0.1
-0.8
+0.3
ypd buoyancy
40 hrs High Buoyancy
-0.5
-0.1
+0.3
+0.6
-0.4
facs on lipid accumulation
Sorted High BODIPY Gate
+0.2
-0.3
-0.0
-0.1
+0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.1
-0.0
-0.2
+0.4
-0.2
growth on oleic acid
YNB Glucose
-0.0
-0.1
+0.3
-0.2
+0.0
auxotrophy
Dropout Complete
-0.3
-0.0
-0.1
+0.0
+0.7
ypd buoyancy
40 hrs Median Buoyancy
+0.1
-0.0
+0.1
+0.4
-0.3
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.0
+0.0
-0.0
+0.8
-0.1
growth on oleic acid
YNB Oleic Acid
-0.3
-0.3
+0.2
+1.0
+0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.6
-0.1
-0.0
+0.5
-0.2
ypd buoyancy
40 hrs Low Buoyancy
-0.5
-0.1
+0.4
+1.1
-0.1
auxotrophy
YNB Glucose
+0.2
+0.1
+0.1
+0.0
+0.6
growth on ricinoleic acid
YNB Glucose
+0.2
+0.3
+0.1
-0.2
+0.6
auxotrophy
YNB Glucose 75mM Arginine
-0.1
-0.0
+0.1
+0.8
+0.7
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.2
-0.0
+0.2
+1.3
-0.2
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