Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 15470 and 15471 are separated by 1249 nucleotides15471 and 15472 are separated by 552 nucleotides15472 and 15473 are separated by 422 nucleotides15473 and 15474 are separated by 87 nucleotides mRNA_7102: 15470 - K03441 GLP-F aquaglyceroporin related protein, other eukaryote, at 882,881 to 885,755 15470 mRNA_7103: 15471 - Hypothetical Protein, at 887,005 to 887,880 15471 mRNA_7104: 15472 - K09448 TEAD transcriptional enhancer factor, at 888,433 to 891,786 15472 mRNA_7105: 15473 - KOG1890 Phosphoinositide phosphatase SAC1, at 892,209 to 895,612 15473 mRNA_7106: 15474 - K11313 SUPT3H, SPT3 transcription initiation protein SPT3, at 895,700 to 897,201 15474
Group Condition mRNA_7102 mRNA_7103 mRNA_7104 mRNA_7105 mRNA_7106
15470 15471 15472 15473 15474
growth on ricinoleic acid YNB Ricinoleic Acid -0.4 -3.5 +0.4 -0.5 +0.6
ypd buoyancy 40 hrs No Buoyancy Separation +0.2 -2.7 -0.5 +0.8 +0.0
facs on lipid accumulation Sorted Low BODIPY Gate -0.3 -1.8 -0.3 -0.3 +1.0
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.0 +0.5 -0.2 -0.1 -1.3
facs on lipid accumulation Sorted High BODIPY Gate -0.0 -0.1 +0.2 -0.2 -0.5
facs on lipid accumulation Sorted No BODIPY Gate +0.1 -1.5 +0.4 -0.3 +0.7
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 -0.8 +0.3 -0.6 +0.8
growth on oleic acid YNB Glucose +0.3 -0.2 +0.0 +0.1 -0.4
growth on ypd YPD -0.1 -1.6 +0.2 +0.5 +1.1
ypd buoyancy 40 hrs Median Buoyancy +0.1 +0.4 -0.3 +0.3 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2 +0.4 -0.2 -0.2 +0.6
auxotrophy YNB Glucose 75mM Methionine +0.1 -0.4 +0.6 -0.2 +0.3
growth on ricinoleic acid YNB Glucose +0.1 -0.2 +0.6 -0.3 +0.4
ypd buoyancy 40 hrs High Buoyancy +0.3 +0.6 -0.4 +0.3 -0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.2 +1.3 -0.2 -0.2 -0.2
ypd buoyancy 40 hrs Low Buoyancy +0.4 +1.1 -0.1 -0.0 -0.3
growth on oleic acid YNB Oleic Acid +0.2 +1.0 +0.2 -0.2 +0.1
auxotrophy YNB Glucose +0.1 +0.0 +0.6 +0.1 +0.5
auxotrophy YNB Glucose 75mM Arginine +0.1 +0.8 +0.7 +0.2 -0.0
auxotrophy Dropout Complete -0.1 +0.0 +0.7 +0.1 +1.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.0 +0.8 -0.1 +0.1 +1.3
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