Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 15476 and 15477 are separated by 323 nucleotides15477 and 15478 are separated by 370 nucleotides15478 and 15479 are separated by 280 nucleotides15479 and 15480 are separated by 399 nucleotides mRNA_7108: 15476 - HMMPfam-Arrestin (or S-antigen), C-terminal domain-PF02752,SMART-Arrestin (or S-antigen), C-terminal domain-SM01017,SUPERFAMILY--SSF81296, at 899,228 to 903,559 15476 mRNA_7109: 15477 - HMMPfam-C2 domain-PF00168,ProSiteProfiles-C2 domain profile.-PS50004,SMART-Protein kinase C conserved region 2 (CalB)-SM00239,SUPERFAMILY--SSF49562, at 903,883 to 906,158 15477 mRNA_7110: 15478 - HMMPfam-Zinc-binding dehydrogenase-PF00107,HMMPfam-Alcohol dehydrogenase GroES-like domain-PF08240,SMART-Enoylreductase-SM00829,SUPERFAMILY--SSF50129,SUPERFAMILY--SSF51735, at 906,529 to 908,168 15478 mRNA_7111: 15479 - Interpro Subunit 11 of the general transcription factor TFIIH, at 908,449 to 909,688 15479 mRNA_7112: 15480 - Interpro DNA-directed RNA polymerase I subunit RPA34.5 0, at 910,088 to 911,391 15480
Group Condition mRNA_7108 mRNA_7109 mRNA_7110 mRNA_7111 mRNA_7112
15476 15477 15478 15479 15480
ypd buoyancy 40 hrs No Buoyancy Separation -0.3 +0.0 -0.9 -0.7 -0.3
facs on lipid accumulation Sorted No BODIPY Gate -0.3 -0.5 -0.0 +0.2 -0.2
auxotrophy YNB Glucose -0.1 -0.1 -0.4 +0.3 -0.6
growth on oleic acid YNB Glucose -0.0 -0.2 -0.2 -0.0 -0.3
auxotrophy Dropout Complete -0.0 -0.3 +0.1 +0.3 -0.8
auxotrophy YNB Glucose 75mM Methionine -0.3 -0.4 -0.0 +0.5 -0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 -0.4 +0.0 +0.2 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid +0.0 -0.2 -0.1 +0.3 -0.3
auxotrophy YNB Glucose 75mM Arginine -0.1 -0.2 -0.1 +0.6 -0.4
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.0 -0.6 -0.1 +0.4 +0.0
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 -0.0 -0.3 -0.1 +0.2
growth on ypd YPD +0.1 -0.3 -0.1 +0.0 +0.1
growth on oleic acid YNB Oleic Acid -0.2 +0.1 +0.1 -0.0 -0.0
growth on ricinoleic acid YNB Ricinoleic Acid +0.3 +0.2 -0.0 -0.3 -0.1
ypd buoyancy 40 hrs High Buoyancy +0.0 -0.2 +0.0 +0.1 +0.3
ypd buoyancy 40 hrs Median Buoyancy +0.2 -0.0 -0.2 +0.3 +0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 -0.4 -0.0 +0.5 +0.2
growth on ricinoleic acid YNB Glucose +0.1 -0.1 -0.0 +0.3 +0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.0 +0.0 -0.2 +0.5 +0.2
ypd buoyancy 40 hrs Low Buoyancy +0.3 +0.1 -0.2 +0.3 +0.0
facs on lipid accumulation Sorted High BODIPY Gate -0.0 -0.4 +0.5 +0.9 +0.1
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