Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 15478 and 15479 are separated by 280 nucleotides15479 and 15480 are separated by 399 nucleotides15480 and 15481 are separated by 211 nucleotides15481 and 15482 are separated by 889 nucleotides mRNA_7110: 15478 - HMMPfam-Zinc-binding dehydrogenase-PF00107,HMMPfam-Alcohol dehydrogenase GroES-like domain-PF08240,SMART-Enoylreductase-SM00829,SUPERFAMILY--SSF50129,SUPERFAMILY--SSF51735, at 906,529 to 908,168 15478 mRNA_7111: 15479 - Interpro Subunit 11 of the general transcription factor TFIIH, at 908,449 to 909,688 15479 mRNA_7112: 15480 - Interpro DNA-directed RNA polymerase I subunit RPA34.5 0, at 910,088 to 911,391 15480 mRNA_7113: 15481 - Hypothetical Protein, at 911,603 to 912,181 15481 mRNA_7114: 15482 - K00383 GSR, gor glutathione reductase (NADPH), at 913,071 to 914,998 15482
Group Condition mRNA_7110 mRNA_7111 mRNA_7112 mRNA_7113 mRNA_7114
15478 15479 15480 15481 15482
ypd buoyancy 40 hrs No Buoyancy Separation -0.9 -0.7 -0.3 -2.7 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid -0.0 -0.3 -0.1 -0.9 N.D.
growth on ypd YPD -0.1 +0.0 +0.1 -1.0 N.D.
ypd buoyancy 40 hrs Median Buoyancy -0.2 +0.3 +0.1 -0.8 N.D.
auxotrophy YNB Glucose -0.4 +0.3 -0.6 +0.2 N.D.
ypd buoyancy 40 hrs Low Buoyancy -0.2 +0.3 +0.0 -0.5 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 +0.3 -0.3 -0.1 N.D.
auxotrophy YNB Glucose 75mM Methionine -0.0 +0.5 -0.3 -0.3 N.D.
auxotrophy Dropout Complete +0.1 +0.3 -0.8 +0.2 N.D.
auxotrophy YNB Glucose 75mM Arginine -0.1 +0.6 -0.4 -0.1 N.D.
growth on oleic acid YNB Glucose -0.2 -0.0 -0.3 +0.5 N.D.
ypd buoyancy 40 hrs High Buoyancy +0.0 +0.1 +0.3 -0.4 N.D.
growth on ricinoleic acid YNB Glucose -0.0 +0.3 +0.1 -0.2 N.D.
facs on lipid accumulation Sorted No BODIPY Gate -0.0 +0.2 -0.2 +0.3 N.D.
growth on oleic acid YNB Oleic Acid +0.1 -0.0 -0.0 +0.5 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2 +0.5 +0.2 +0.1 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 +0.4 +0.0 +0.5 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.0 +0.2 -0.1 +0.9 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.0 +0.5 +0.2 +0.7 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate -0.3 -0.1 +0.2 +1.7 N.D.
facs on lipid accumulation Sorted High BODIPY Gate +0.5 +0.9 +0.1 +0.8 N.D.
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