Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 15489 and 15490 are separated by 422 nucleotides15490 and 15491 are separated by 147 nucleotides15491 and 15492 are separated by 248 nucleotides15492 and 15493 are separated by 513 nucleotides mRNA_7121: 15489 - PRINTS-Proline rich extensin signature-PR01217,ProSiteProfiles-EH domain profile.-PS50031, at 928,418 to 929,954 15489 mRNA_7122: 15490 - K14791 PWP1 periodic tryptophan protein 1, at 930,377 to 932,524 15490 mRNA_7123: 15491 - K00683 QPCT glutaminyl-peptide cyclotransferase, at 932,672 to 934,092 15491 mRNA_7124: 15492 - K02872 RP-L13Ae, RPL13A large subunit ribosomal protein L13Ae, at 934,341 to 935,492 15492 mRNA_7125: 15493 - K11315 TADA3, ADA3, NGG1 transcriptional adapter 3, at 936,006 to 938,465 15493
Group Condition mRNA_7121 mRNA_7122 mRNA_7123 mRNA_7124 mRNA_7125
15489 15490 15491 15492 15493
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.2 N.D. +0.3 N.D. -2.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.4 N.D. -0.7 N.D. +0.2
ypd buoyancy 40 hrs No Buoyancy Separation -0.2 N.D. +0.1 N.D. -0.7
facs on lipid accumulation Sorted High BODIPY Gate -0.3 N.D. -0.2 N.D. +0.0
facs on lipid accumulation Sorted No BODIPY Gate -0.5 N.D. -0.3 N.D. +0.5
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.3 N.D. -0.4 N.D. +0.4
ypd buoyancy 40 hrs Median Buoyancy -0.0 N.D. +0.1 N.D. -0.3
facs on lipid accumulation Sorted Low BODIPY Gate -1.1 N.D. -0.1 N.D. +1.2
growth on ricinoleic acid YNB Glucose -0.2 N.D. -0.4 N.D. +0.6
growth on ypd YPD -0.1 N.D. -0.2 N.D. +0.4
ypd buoyancy 40 hrs High Buoyancy -0.3 N.D. +0.1 N.D. +0.4
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.4 N.D. -0.4 N.D. +1.1
growth on oleic acid YNB Glucose -0.3 N.D. -0.0 N.D. +0.8
auxotrophy YNB Glucose 75mM Arginine +0.1 N.D. -0.2 N.D. +0.5
auxotrophy YNB Glucose +0.1 N.D. -0.4 N.D. +0.8
ypd buoyancy 40 hrs Low Buoyancy +0.2 N.D. +0.2 N.D. +0.3
auxotrophy YNB Glucose 75mM Methionine +0.0 N.D. -0.0 N.D. +0.7
auxotrophy Dropout Complete +0.7 N.D. -0.4 N.D. +0.8
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2 N.D. -0.1 N.D. +1.4
growth on ricinoleic acid YNB Ricinoleic Acid -0.0 N.D. -0.3 N.D. +1.4
growth on oleic acid YNB Oleic Acid +0.0 N.D. +0.1 N.D. +1.4
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