Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 15499 and 15500 are separated by 222 nucleotides15500 and 15501 are separated by 242 nucleotides15501 and 15502 are separated by 2619 nucleotides15502 and 15503 are separated by 195 nucleotides mRNA_7131: 15499 - K17800 LETM1, MDM38 LETM1 and EF-hand domain-containing protein 1, mitochondrial, at 949,848 to 952,557 15499 mRNA_7132: 15500 - K16938 SEPT3_9_12 septin 3/9/12, at 952,780 to 954,588 15500 mRNA_7133: 15501 - Hypothetical Protein, at 954,831 to 956,443 15501 mRNA_7134: 15502 - Hypothetical Protein, at 959,063 to 959,893 15502 mRNA_7135: 15503 - K02948 RP-S11, MRPS11, rpsK small subunit ribosomal protein S11, at 960,089 to 960,921 15503
Group Condition mRNA_7131 mRNA_7132 mRNA_7133 mRNA_7134 mRNA_7135
15499 15500 15501 15502 15503
ypd buoyancy 40 hrs No Buoyancy Separation -0.5 N.D. -1.0 +0.6 N.D.
facs on lipid accumulation Sorted No BODIPY Gate -0.6 N.D. -0.3 +0.1 N.D.
growth on ricinoleic acid YNB Glucose -0.5 N.D. -0.6 +0.4 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid -0.6 N.D. -0.6 +0.5 N.D.
growth on ypd YPD -0.7 N.D. -0.4 +0.7 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid -0.4 N.D. -0.3 +0.4 N.D.
ypd buoyancy 40 hrs Low Buoyancy -0.1 N.D. -0.1 +0.0 N.D.
growth on oleic acid YNB Oleic Acid -0.9 N.D. +0.3 +0.4 N.D.
growth on oleic acid YNB Glucose -0.5 N.D. +0.2 +0.1 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2 N.D. +0.2 -0.1 N.D.
ypd buoyancy 40 hrs High Buoyancy +0.2 N.D. -0.2 +0.1 N.D.
auxotrophy YNB Glucose 75mM Methionine -0.6 N.D. +0.3 +0.4 N.D.
auxotrophy Dropout Complete -0.7 N.D. +0.5 +0.4 N.D.
ypd buoyancy 40 hrs Median Buoyancy +0.3 N.D. -0.1 +0.1 N.D.
auxotrophy YNB Glucose 75mM Arginine -0.8 N.D. +0.7 +0.4 N.D.
facs on lipid accumulation Sorted High BODIPY Gate +0.0 N.D. +0.3 +0.0 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.2 N.D. +0.3 +0.2 N.D.
auxotrophy YNB Glucose -0.3 N.D. +0.9 +0.4 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.4 N.D. +0.8 +0.0 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate -0.0 N.D. +0.7 +0.5 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.6 N.D. +0.7 -0.0 N.D.
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