Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
15504 and 15505 are separated by 184 nucleotides
15505 and 15506 are separated by 224 nucleotides
15506 and 15507 are separated by 152 nucleotides
15507 and 15508 are separated by 335 nucleotides
mRNA_7136: 15504 - K01880 GARS, glyS1 glycyl-tRNA synthetase, at 961,158 to 963,860
15504
mRNA_7137: 15505 - KOG1933 Cholesterol transport protein (Niemann-Pick C disease protein), at 964,045 to 968,474
15505
mRNA_7138: 15506 - K14655 RIB2, PUS8 tRNA pseudouridine synthase 8 / 2,5-diamino-6-(5-phospho-D-ribitylamino)-pyrimidin-4(3H)-one deaminase, at 968,699 to 969,330
15506
mRNA_7139: 15507 - K15272 SLC35A1_2_3 solute carrier family 35 (UDP-sugar transporter), member A1/2/3, at 969,483 to 971,578
15507
mRNA_7140: 15508 - KOG1029 Endocytic adaptor protein intersectin, at 971,914 to 976,417
15508
Group
Condition
mRNA
_7136
mRNA
_7137
mRNA
_7138
mRNA
_7139
mRNA
_7140
15504
15505
15506
15507
15508
growth on ricinoleic acid
YNB Methylricinoleic Acid
N.D.
-3.2
N.D.
+0.4
+0.0
growth on ricinoleic acid
YNB Ricinoleic Acid
N.D.
-2.9
N.D.
+0.7
-0.0
growth on ricinoleic acid
YNB Glucose
N.D.
-1.4
N.D.
+0.4
+0.0
ypd buoyancy
40 hrs No Buoyancy Separation
N.D.
-0.3
N.D.
-0.0
-0.4
facs on lipid accumulation
Sorted Low BODIPY Gate
N.D.
-0.1
N.D.
-0.4
-0.1
auxotrophy
YNB Glucose
N.D.
-1.0
N.D.
+0.6
+0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
N.D.
-0.3
N.D.
-0.1
+0.2
auxotrophy
YNB Glucose 75mM Arginine
N.D.
-0.8
N.D.
+0.4
+0.2
ypd buoyancy
40 hrs High Buoyancy
N.D.
+0.2
N.D.
-0.2
-0.2
auxotrophy
YNB Glucose 75mM Methionine
N.D.
-0.6
N.D.
+0.3
+0.2
facs on lipid accumulation
Sorted No BODIPY Gate
N.D.
-0.2
N.D.
+0.0
+0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
N.D.
-0.4
N.D.
+0.0
+0.4
facs on lipid accumulation
Sorted High BODIPY Gate
N.D.
-0.2
N.D.
+0.1
+0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
N.D.
-0.1
N.D.
-0.0
+0.2
growth on ypd
YPD
N.D.
+0.0
N.D.
+0.1
-0.0
growth on oleic acid
YNB Glucose
N.D.
-0.2
N.D.
+0.3
-0.0
growth on oleic acid
YNB Oleic Acid
N.D.
-0.3
N.D.
+0.3
+0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
N.D.
+0.1
N.D.
-0.0
+0.3
ypd buoyancy
40 hrs Median Buoyancy
N.D.
+0.1
N.D.
+0.2
+0.0
auxotrophy
Dropout Complete
N.D.
-0.2
N.D.
+0.7
+0.0
ypd buoyancy
40 hrs Low Buoyancy
N.D.
+0.1
N.D.
+0.5
+0.2
remove
mRNA_7136
plot
remove
mRNA_7137
plot
remove
mRNA_7138
remove
mRNA_7139
plot
remove
mRNA_7140
plot