Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 15508 and 15509 are separated by 110 nucleotides15509 and 15510 are separated by 117 nucleotides15510 and 15511 are separated by 525 nucleotides15511 and 15512 are separated by 921 nucleotides mRNA_7140: 15508 - KOG1029 Endocytic adaptor protein intersectin, at 971,914 to 976,417 15508 mRNA_7141: 15509 - BLAST AP-4 complex subunit epsilon [Leucoagaricus sp. SymC...., at 976,528 to 979,510 15509 mRNA_7142: 15510 - HMMPfam-Domain of unknown function DUF221-PF02714,HMMPfam-Late exocytosis, associated with Golgi transport-PF13967, at 979,628 to 983,826 15510 mRNA_7143: 15511 - HMMPfam-Protein of unknown function (DUF2421)-PF10334,HMMPfam-Fusaric acid resistance protein-like-PF13515,PRINTS-Brefeldin A-sensitivity protein 4 signature-PR02047,ProSiteProfiles-Prokaryotic membrane lipoprotein lipid attachment site profile.-PS51257, at 984,352 to 987,514 15511 mRNA_7144: 15512 - ProSiteProfiles-Zinc finger C3H1-type profile.-PS50103, at 988,436 to 990,722 15512
Group Condition mRNA_7140 mRNA_7141 mRNA_7142 mRNA_7143 mRNA_7144
15508 15509 15510 15511 15512
ypd buoyancy 40 hrs No Buoyancy Separation -0.4 -0.4 +0.4 -0.2 -0.2
growth on ricinoleic acid YNB Ricinoleic Acid -0.0 +0.4 -0.6 -0.3 -0.0
ypd buoyancy 40 hrs Median Buoyancy +0.0 -0.1 -0.0 -0.1 -0.3
growth on oleic acid YNB Glucose -0.0 +0.0 -0.1 -0.4 +0.1
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 +0.5 -0.2 -0.5 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid +0.0 +0.2 -0.3 -0.2 -0.2
facs on lipid accumulation Sorted No BODIPY Gate +0.2 -0.1 -0.4 +0.0 +0.2
ypd buoyancy 40 hrs High Buoyancy -0.2 +0.1 +0.1 -0.1 +0.1
auxotrophy YNB Glucose +0.2 -0.0 -0.0 -0.2 +0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.2 +0.2 +0.1 -0.2 -0.0
auxotrophy YNB Glucose 75mM Methionine +0.2 -0.1 -0.0 -0.2 +0.5
growth on ricinoleic acid YNB Glucose +0.0 +0.6 -0.2 -0.2 +0.1
auxotrophy YNB Glucose 75mM Arginine +0.2 -0.1 +0.0 -0.1 +0.3
auxotrophy Dropout Complete +0.0 +0.1 -0.1 -0.1 +0.5
ypd buoyancy 40 hrs Low Buoyancy +0.2 -0.1 +0.1 +0.1 +0.1
growth on oleic acid YNB Oleic Acid +0.2 +0.1 +0.3 -0.2 +0.0
facs on lipid accumulation Sorted High BODIPY Gate +0.1 +0.1 -0.0 +0.2 +0.0
growth on ypd YPD -0.0 +0.2 +0.1 +0.3 +0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.3 +0.1 +0.1 +0.2 +0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.2 +0.2 +0.3 +0.1 +0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.4 +0.1 +0.5 +0.1 +0.1
remove
mRNA_7140
plot
remove
mRNA_7141
plot
remove
mRNA_7142
remove
mRNA_7143
plot
remove
mRNA_7144
plot