Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
15508 and 15509 are separated by 110 nucleotides
15509 and 15510 are separated by 117 nucleotides
15510 and 15511 are separated by 525 nucleotides
15511 and 15512 are separated by 921 nucleotides
mRNA_7140: 15508 - KOG1029 Endocytic adaptor protein intersectin, at 971,914 to 976,417
15508
mRNA_7141: 15509 - BLAST AP-4 complex subunit epsilon [Leucoagaricus sp. SymC...., at 976,528 to 979,510
15509
mRNA_7142: 15510 - HMMPfam-Domain of unknown function DUF221-PF02714,HMMPfam-Late exocytosis, associated with Golgi transport-PF13967, at 979,628 to 983,826
15510
mRNA_7143: 15511 - HMMPfam-Protein of unknown function (DUF2421)-PF10334,HMMPfam-Fusaric acid resistance protein-like-PF13515,PRINTS-Brefeldin A-sensitivity protein 4 signature-PR02047,ProSiteProfiles-Prokaryotic membrane lipoprotein lipid attachment site profile.-PS51257, at 984,352 to 987,514
15511
mRNA_7144: 15512 - ProSiteProfiles-Zinc finger C3H1-type profile.-PS50103, at 988,436 to 990,722
15512
Group
Condition
mRNA
_7140
mRNA
_7141
mRNA
_7142
mRNA
_7143
mRNA
_7144
15508
15509
15510
15511
15512
ypd buoyancy
40 hrs No Buoyancy Separation
-0.4
-0.4
+0.4
-0.2
-0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.0
+0.4
-0.6
-0.3
-0.0
ypd buoyancy
40 hrs Median Buoyancy
+0.0
-0.1
-0.0
-0.1
-0.3
growth on oleic acid
YNB Glucose
-0.0
+0.0
-0.1
-0.4
+0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.1
+0.5
-0.2
-0.5
-0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.0
+0.2
-0.3
-0.2
-0.2
facs on lipid accumulation
Sorted No BODIPY Gate
+0.2
-0.1
-0.4
+0.0
+0.2
ypd buoyancy
40 hrs High Buoyancy
-0.2
+0.1
+0.1
-0.1
+0.1
auxotrophy
YNB Glucose
+0.2
-0.0
-0.0
-0.2
+0.3
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.2
+0.2
+0.1
-0.2
-0.0
auxotrophy
YNB Glucose 75mM Methionine
+0.2
-0.1
-0.0
-0.2
+0.5
growth on ricinoleic acid
YNB Glucose
+0.0
+0.6
-0.2
-0.2
+0.1
auxotrophy
YNB Glucose 75mM Arginine
+0.2
-0.1
+0.0
-0.1
+0.3
auxotrophy
Dropout Complete
+0.0
+0.1
-0.1
-0.1
+0.5
ypd buoyancy
40 hrs Low Buoyancy
+0.2
-0.1
+0.1
+0.1
+0.1
growth on oleic acid
YNB Oleic Acid
+0.2
+0.1
+0.3
-0.2
+0.0
facs on lipid accumulation
Sorted High BODIPY Gate
+0.1
+0.1
-0.0
+0.2
+0.0
growth on ypd
YPD
-0.0
+0.2
+0.1
+0.3
+0.0
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.3
+0.1
+0.1
+0.2
+0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.2
+0.2
+0.3
+0.1
+0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.4
+0.1
+0.5
+0.1
+0.1
remove
mRNA_7140
plot
remove
mRNA_7141
plot
remove
mRNA_7142
remove
mRNA_7143
plot
remove
mRNA_7144
plot