Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 15509 and 15510 are separated by 117 nucleotides15510 and 15511 are separated by 525 nucleotides15511 and 15512 are separated by 921 nucleotides15512 and 15513 are separated by 442 nucleotides mRNA_7141: 15509 - BLAST AP-4 complex subunit epsilon [Leucoagaricus sp. SymC...., at 976,528 to 979,510 15509 mRNA_7142: 15510 - HMMPfam-Domain of unknown function DUF221-PF02714,HMMPfam-Late exocytosis, associated with Golgi transport-PF13967, at 979,628 to 983,826 15510 mRNA_7143: 15511 - HMMPfam-Protein of unknown function (DUF2421)-PF10334,HMMPfam-Fusaric acid resistance protein-like-PF13515,PRINTS-Brefeldin A-sensitivity protein 4 signature-PR02047,ProSiteProfiles-Prokaryotic membrane lipoprotein lipid attachment site profile.-PS51257, at 984,352 to 987,514 15511 mRNA_7144: 15512 - ProSiteProfiles-Zinc finger C3H1-type profile.-PS50103, at 988,436 to 990,722 15512 mRNA_7145: 15513 - BLAST putative ccch zinc finger dna binding protein [Eu..., at 991,165 to 992,673 15513
Group Condition mRNA_7141 mRNA_7142 mRNA_7143 mRNA_7144 mRNA_7145
15509 15510 15511 15512 15513
ypd buoyancy 40 hrs No Buoyancy Separation -0.4 +0.4 -0.2 -0.2 -0.6
facs on lipid accumulation Sorted Low BODIPY Gate +0.5 -0.2 -0.5 -0.1 -0.7
facs on lipid accumulation Sorted No BODIPY Gate -0.1 -0.4 +0.0 +0.2 -0.4
ypd buoyancy 40 hrs Median Buoyancy -0.1 -0.0 -0.1 -0.3 -0.0
growth on oleic acid YNB Glucose +0.0 -0.1 -0.4 +0.1 -0.2
growth on ricinoleic acid YNB Ricinoleic Acid +0.4 -0.6 -0.3 -0.0 -0.0
facs on lipid accumulation Sorted High BODIPY Gate +0.1 -0.0 +0.2 +0.0 -0.8
growth on ricinoleic acid YNB Methylricinoleic Acid +0.2 -0.3 -0.2 -0.2 +0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.2 +0.1 -0.2 -0.0 -0.2
growth on oleic acid YNB Oleic Acid +0.1 +0.3 -0.2 +0.0 -0.1
ypd buoyancy 40 hrs High Buoyancy +0.1 +0.1 -0.1 +0.1 -0.1
auxotrophy YNB Glucose 75mM Methionine -0.1 -0.0 -0.2 +0.5 +0.0
auxotrophy YNB Glucose 75mM Arginine -0.1 +0.0 -0.1 +0.3 +0.1
growth on ricinoleic acid YNB Glucose +0.6 -0.2 -0.2 +0.1 -0.0
ypd buoyancy 40 hrs Low Buoyancy -0.1 +0.1 +0.1 +0.1 +0.2
auxotrophy YNB Glucose -0.0 -0.0 -0.2 +0.3 +0.4
auxotrophy Dropout Complete +0.1 -0.1 -0.1 +0.5 +0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.2 +0.3 +0.1 +0.1 -0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.1 +0.1 +0.2 +0.1 +0.1
growth on ypd YPD +0.2 +0.1 +0.3 +0.0 +0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.1 +0.5 +0.1 +0.1 +0.1
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