Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 15510 and 15511 are separated by 525 nucleotides15511 and 15512 are separated by 921 nucleotides15512 and 15513 are separated by 442 nucleotides15513 and 15514 are separated by 646 nucleotides mRNA_7142: 15510 - HMMPfam-Domain of unknown function DUF221-PF02714,HMMPfam-Late exocytosis, associated with Golgi transport-PF13967, at 979,628 to 983,826 15510 mRNA_7143: 15511 - HMMPfam-Protein of unknown function (DUF2421)-PF10334,HMMPfam-Fusaric acid resistance protein-like-PF13515,PRINTS-Brefeldin A-sensitivity protein 4 signature-PR02047,ProSiteProfiles-Prokaryotic membrane lipoprotein lipid attachment site profile.-PS51257, at 984,352 to 987,514 15511 mRNA_7144: 15512 - ProSiteProfiles-Zinc finger C3H1-type profile.-PS50103, at 988,436 to 990,722 15512 mRNA_7145: 15513 - BLAST putative ccch zinc finger dna binding protein [Eu..., at 991,165 to 992,673 15513 mRNA_7146: 15514 - Hypothetical Protein, at 993,320 to 994,345 15514
Group Condition mRNA_7142 mRNA_7143 mRNA_7144 mRNA_7145 mRNA_7146
15510 15511 15512 15513 15514
ypd buoyancy 40 hrs No Buoyancy Separation +0.4 -0.2 -0.2 -0.6 -1.0
facs on lipid accumulation Sorted Low BODIPY Gate -0.2 -0.5 -0.1 -0.7 +0.3
ypd buoyancy 40 hrs Median Buoyancy -0.0 -0.1 -0.3 -0.0 -0.6
growth on ricinoleic acid YNB Ricinoleic Acid -0.6 -0.3 -0.0 -0.0 +0.2
ypd buoyancy 40 hrs High Buoyancy +0.1 -0.1 +0.1 -0.1 -0.3
facs on lipid accumulation Sorted High BODIPY Gate -0.0 +0.2 +0.0 -0.8 +0.5
ypd buoyancy 40 hrs Low Buoyancy +0.1 +0.1 +0.1 +0.2 -0.4
growth on ricinoleic acid YNB Methylricinoleic Acid -0.3 -0.2 -0.2 +0.2 +0.4
facs on lipid accumulation Sorted No BODIPY Gate -0.4 +0.0 +0.2 -0.4 +0.7
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.1 -0.2 -0.0 -0.2 +0.6
growth on ricinoleic acid YNB Glucose -0.2 -0.2 +0.1 -0.0 +0.6
growth on oleic acid YNB Glucose -0.1 -0.4 +0.1 -0.2 +1.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.1 +0.2 +0.1 +0.1 +0.2
growth on oleic acid YNB Oleic Acid +0.3 -0.2 +0.0 -0.1 +0.8
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.3 +0.1 +0.1 -0.2 +0.5
auxotrophy YNB Glucose 75mM Arginine +0.0 -0.1 +0.3 +0.1 +0.6
auxotrophy Dropout Complete -0.1 -0.1 +0.5 +0.1 +0.8
auxotrophy YNB Glucose 75mM Methionine -0.0 -0.2 +0.5 +0.0 +0.9
auxotrophy YNB Glucose -0.0 -0.2 +0.3 +0.4 +1.2
growth on ypd YPD +0.1 +0.3 +0.0 +0.2 +1.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.5 +0.1 +0.1 +0.1 +1.0
remove
mRNA_7142
plot
remove
mRNA_7143
plot
remove
mRNA_7144
remove
mRNA_7145
plot
remove
mRNA_7146
plot