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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
15518 and 15519 are separated by 194 nucleotides
15519 and 15520 are separated by 700 nucleotides
15520 and 15521 are separated by 384 nucleotides
15521 and 15522 are separated by 170 nucleotides
mRNA_7150: 15518 - K01874 MARS, metG methionyl-tRNA synthetase, at 999,141 to 1,001,312
15518
mRNA_7151: 15519 - BLAST putative transmembrane protein [Rhizoctonia solani 123E], at 1,001,507 to 1,002,023
15519
mRNA_7152: 15520 - Hypothetical Protein, at 1,002,724 to 1,003,659
15520
mRNA_7153: 15521 - Hypothetical Protein, at 1,004,044 to 1,005,448
15521
mRNA_7154: 15522 - Hypothetical Protein, at 1,005,619 to 1,007,584
15522
Group
Condition
mRNA
_7150
mRNA
_7151
mRNA
_7152
mRNA
_7153
mRNA
_7154
15518
15519
15520
15521
15522
facs on lipid accumulation
Sorted High BODIPY Gate
N.D.
N.D.
-1.2
-0.4
-0.5
buoyancy on lipid accumulation
40 hrs Low Buoyancy
N.D.
N.D.
-0.4
-0.1
-0.7
buoyancy on lipid accumulation
40 hrs High Buoyancy
N.D.
N.D.
-0.9
+0.1
-0.3
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
N.D.
N.D.
-0.4
-0.0
-0.5
buoyancy on lipid accumulation
40 hrs Median Buoyancy
N.D.
N.D.
-0.4
+0.1
-0.5
growth on ricinoleic acid
YNB Ricinoleic Acid
N.D.
N.D.
-0.1
+0.2
-0.9
growth on ricinoleic acid
YNB Methylricinoleic Acid
N.D.
N.D.
+0.2
+0.0
-0.9
growth on oleic acid
YNB Oleic Acid
N.D.
N.D.
+0.1
-0.1
-0.4
ypd buoyancy
40 hrs Median Buoyancy
N.D.
N.D.
-0.1
-0.0
-0.1
auxotrophy
YNB Glucose 75mM Methionine
N.D.
N.D.
-0.3
+0.1
-0.1
growth on ricinoleic acid
YNB Glucose
N.D.
N.D.
+0.1
+0.0
-0.2
ypd buoyancy
40 hrs No Buoyancy Separation
N.D.
N.D.
-0.1
-0.3
+0.3
growth on oleic acid
YNB Glucose
N.D.
N.D.
+0.3
-0.2
-0.1
ypd buoyancy
40 hrs Low Buoyancy
N.D.
N.D.
+0.3
+0.1
-0.3
auxotrophy
YNB Glucose 75mM Arginine
N.D.
N.D.
+0.0
+0.1
-0.0
auxotrophy
YNB Glucose
N.D.
N.D.
-0.4
+0.1
+0.3
auxotrophy
Dropout Complete
N.D.
N.D.
-0.1
+0.1
+0.2
growth on ypd
YPD
N.D.
N.D.
+0.2
+0.1
-0.1
ypd buoyancy
40 hrs High Buoyancy
N.D.
N.D.
+0.4
-0.2
-0.0
facs on lipid accumulation
Sorted No BODIPY Gate
N.D.
N.D.
+0.1
+0.5
-0.3
facs on lipid accumulation
Sorted Low BODIPY Gate
N.D.
N.D.
+1.2
+1.8
+0.6
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