Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 15523 and 15524 are separated by 2502 nucleotides15524 and 15525 are separated by 867 nucleotides15525 and 15526 are separated by 180 nucleotides15526 and 15527 are separated by 138 nucleotides mRNA_7155: 15523 - Hypothetical Protein, at 1,007,803 to 1,008,291 15523 mRNA_7156: 15524 - K20102 YTHDF YTH domain-containing family protein, at 1,010,794 to 1,011,457 15524 mRNA_7157: 15525 - KOG2936 Uncharacterized conserved protein, at 1,012,325 to 1,013,982 15525 mRNA_7158: 15526 - K09529 DNAJC9 DnaJ homolog subfamily C member 9, at 1,014,163 to 1,016,901 15526 mRNA_7159: 15527 - HMMPfam-RNA recognition motif (a.k.a. RRM, RBD, or RNP domain)-PF14259,ProSiteProfiles-Eukaryotic RNA Recognition Motif (RRM) profile.-PS50102,SMART-RNA recognition motif-SM00360,SUPERFAMILY--SSF54928, at 1,017,040 to 1,019,381 15527
Group Condition mRNA_7155 mRNA_7156 mRNA_7157 mRNA_7158 mRNA_7159
15523 15524 15525 15526 15527
ypd buoyancy 40 hrs No Buoyancy Separation -0.3 -1.2 +0.3 -1.7 -0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.9 -0.5 -0.8 -0.5 -0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 +0.0 -0.4 -0.8 -0.4
growth on ricinoleic acid YNB Ricinoleic Acid -0.3 +0.2 -0.5 -0.2 -0.8
facs on lipid accumulation Sorted No BODIPY Gate -0.3 -0.1 -0.6 -0.3 -0.1
facs on lipid accumulation Sorted High BODIPY Gate -0.6 -0.5 -0.5 +0.1 +0.2
auxotrophy YNB Glucose 75mM Methionine +0.1 +0.1 -0.7 -0.4 -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2 +0.0 -0.3 -0.5 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate -0.6 -0.1 -0.6 -0.0 +0.2
auxotrophy YNB Glucose +0.1 +0.4 -0.6 -0.7 -0.1
auxotrophy Dropout Complete -0.0 +0.4 -0.6 -0.4 -0.1
auxotrophy YNB Glucose 75mM Arginine +0.2 +0.2 -0.5 -0.3 -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid +0.5 +1.0 -0.8 -0.2 -0.8
growth on oleic acid YNB Glucose +0.6 +0.1 -0.6 +0.1 -0.5
growth on ricinoleic acid YNB Glucose +0.5 +0.9 -0.5 -0.5 -0.4
growth on ypd YPD +0.4 +0.1 +0.1 -0.6 +0.1
ypd buoyancy 40 hrs Median Buoyancy -0.2 +0.4 +0.1 +0.2 -0.1
ypd buoyancy 40 hrs Low Buoyancy -0.3 +0.2 +0.3 +0.2 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.0 +1.0 +0.0 -0.4 -0.2
growth on oleic acid YNB Oleic Acid +0.4 +0.4 -0.2 +0.5 -0.3
ypd buoyancy 40 hrs High Buoyancy +0.1 +0.3 +0.2 +0.3 +0.2
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