Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt 15525 and 15526 are separated by 180 nucleotides15526 and 15527 are separated by 138 nucleotides15527 and 15528 are separated by 242 nucleotides15528 and 15529 are separated by 270 nucleotides mRNA_7157: 15525 - KOG2936 Uncharacterized conserved protein, at 1,012,325 to 1,013,982 15525 mRNA_7158: 15526 - K09529 DNAJC9 DnaJ homolog subfamily C member 9, at 1,014,163 to 1,016,901 15526 mRNA_7159: 15527 - HMMPfam-RNA recognition motif (a.k.a. RRM, RBD, or RNP domain)-PF14259,ProSiteProfiles-Eukaryotic RNA Recognition Motif (RRM) profile.-PS50102,SMART-RNA recognition motif-SM00360,SUPERFAMILY--SSF54928, at 1,017,040 to 1,019,381 15527 mRNA_7160: 15528 - HMMPfam-RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)-PF00076,ProSiteProfiles-Eukaryotic RNA Recognition Motif (RRM) profile.-PS50102,SMART-RNA recognition motif-SM00360,SUPERFAMILY--SSF54928, at 1,019,624 to 1,022,322 15528 mRNA_7161: 15529 - Hypothetical Protein, at 1,022,593 to 1,024,140 15529
Group Condition mRNA_7157 mRNA_7158 mRNA_7159 mRNA_7160 mRNA_7161
15525 15526 15527 15528 15529
growth on ricinoleic acid YNB Ricinoleic Acid -0.5 -0.2 -0.8 -0.5 -0.7
growth on ricinoleic acid YNB Methylricinoleic Acid -0.8 -0.2 -0.8 -0.3 -0.4
auxotrophy YNB Glucose 75mM Arginine -0.5 -0.3 -0.2 -0.2 -0.6
ypd buoyancy 40 hrs No Buoyancy Separation +0.3 -1.7 -0.4 +0.6 -0.6
auxotrophy YNB Glucose -0.6 -0.7 -0.1 -0.1 -0.1
growth on ricinoleic acid YNB Glucose -0.5 -0.5 -0.4 -0.2 +0.1
auxotrophy YNB Glucose 75mM Methionine -0.7 -0.4 -0.2 -0.0 -0.1
auxotrophy Dropout Complete -0.6 -0.4 -0.1 -0.1 -0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.3 -0.5 -0.1 -0.3 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.4 -0.8 -0.4 -0.1 +0.5
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.8 -0.5 -0.0 +0.1 +0.3
growth on oleic acid YNB Glucose -0.6 +0.1 -0.5 +0.3 -0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.6 -0.3 -0.1 +0.1 +0.1
growth on ypd YPD +0.1 -0.6 +0.1 -0.2 +0.0
facs on lipid accumulation Sorted Low BODIPY Gate -0.6 -0.0 +0.2 +0.0 -0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.0 -0.4 -0.2 +0.0 +0.2
facs on lipid accumulation Sorted High BODIPY Gate -0.5 +0.1 +0.2 -0.0 +0.1
ypd buoyancy 40 hrs Median Buoyancy +0.1 +0.2 -0.1 -0.0 -0.2
growth on oleic acid YNB Oleic Acid -0.2 +0.5 -0.3 -0.1 +0.1
ypd buoyancy 40 hrs High Buoyancy +0.2 +0.3 +0.2 +0.0 -0.4
ypd buoyancy 40 hrs Low Buoyancy +0.3 +0.2 -0.1 +0.0 -0.1
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