Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 15526 and 15527 are separated by 138 nucleotides15527 and 15528 are separated by 242 nucleotides15528 and 15529 are separated by 270 nucleotides15529 and 15530 are separated by 1059 nucleotides mRNA_7158: 15526 - K09529 DNAJC9 DnaJ homolog subfamily C member 9, at 1,014,163 to 1,016,901 15526 mRNA_7159: 15527 - HMMPfam-RNA recognition motif (a.k.a. RRM, RBD, or RNP domain)-PF14259,ProSiteProfiles-Eukaryotic RNA Recognition Motif (RRM) profile.-PS50102,SMART-RNA recognition motif-SM00360,SUPERFAMILY--SSF54928, at 1,017,040 to 1,019,381 15527 mRNA_7160: 15528 - HMMPfam-RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)-PF00076,ProSiteProfiles-Eukaryotic RNA Recognition Motif (RRM) profile.-PS50102,SMART-RNA recognition motif-SM00360,SUPERFAMILY--SSF54928, at 1,019,624 to 1,022,322 15528 mRNA_7161: 15529 - Hypothetical Protein, at 1,022,593 to 1,024,140 15529 mRNA_7162: 15530 - ProSiteProfiles-Zinc finger C3H1-type profile.-PS50103, at 1,025,200 to 1,027,264 15530
Group Condition mRNA_7158 mRNA_7159 mRNA_7160 mRNA_7161 mRNA_7162
15526 15527 15528 15529 15530
ypd buoyancy 40 hrs No Buoyancy Separation -1.7 -0.4 +0.6 -0.6 -1.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.2 -0.8 -0.5 -0.7 -0.0
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2 -0.8 -0.3 -0.4 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.5 -0.1 -0.3 -0.1 -0.6
growth on ricinoleic acid YNB Glucose -0.5 -0.4 -0.2 +0.1 -0.2
auxotrophy YNB Glucose 75mM Arginine -0.3 -0.2 -0.2 -0.6 +0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.8 -0.4 -0.1 +0.5 -0.2
growth on ypd YPD -0.6 +0.1 -0.2 +0.0 -0.2
auxotrophy YNB Glucose -0.7 -0.1 -0.1 -0.1 +0.3
auxotrophy Dropout Complete -0.4 -0.1 -0.1 -0.3 +0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.4 -0.2 +0.0 +0.2 -0.5
auxotrophy YNB Glucose 75mM Methionine -0.4 -0.2 -0.0 -0.1 +0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.5 -0.0 +0.1 +0.3 -0.4
growth on oleic acid YNB Glucose +0.1 -0.5 +0.3 -0.1 -0.3
ypd buoyancy 40 hrs Median Buoyancy +0.2 -0.1 -0.0 -0.2 -0.2
facs on lipid accumulation Sorted No BODIPY Gate -0.3 -0.1 +0.1 +0.1 +0.1
ypd buoyancy 40 hrs Low Buoyancy +0.2 -0.1 +0.0 -0.1 -0.1
ypd buoyancy 40 hrs High Buoyancy +0.3 +0.2 +0.0 -0.4 -0.0
growth on oleic acid YNB Oleic Acid +0.5 -0.3 -0.1 +0.1 -0.1
facs on lipid accumulation Sorted High BODIPY Gate +0.1 +0.2 -0.0 +0.1 +0.2
facs on lipid accumulation Sorted Low BODIPY Gate -0.0 +0.2 +0.0 -0.0 +0.5
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