Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 15527 and 15528 are separated by 242 nucleotides15528 and 15529 are separated by 270 nucleotides15529 and 15530 are separated by 1059 nucleotides15530 and 15531 are separated by 175 nucleotides mRNA_7159: 15527 - HMMPfam-RNA recognition motif (a.k.a. RRM, RBD, or RNP domain)-PF14259,ProSiteProfiles-Eukaryotic RNA Recognition Motif (RRM) profile.-PS50102,SMART-RNA recognition motif-SM00360,SUPERFAMILY--SSF54928, at 1,017,040 to 1,019,381 15527 mRNA_7160: 15528 - HMMPfam-RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)-PF00076,ProSiteProfiles-Eukaryotic RNA Recognition Motif (RRM) profile.-PS50102,SMART-RNA recognition motif-SM00360,SUPERFAMILY--SSF54928, at 1,019,624 to 1,022,322 15528 mRNA_7161: 15529 - Hypothetical Protein, at 1,022,593 to 1,024,140 15529 mRNA_7162: 15530 - ProSiteProfiles-Zinc finger C3H1-type profile.-PS50103, at 1,025,200 to 1,027,264 15530 mRNA_7163: 15531 - Hypothetical Protein, at 1,027,440 to 1,028,287 15531
Group Condition mRNA_7159 mRNA_7160 mRNA_7161 mRNA_7162 mRNA_7163
15527 15528 15529 15530 15531
growth on ricinoleic acid YNB Ricinoleic Acid -0.8 -0.5 -0.7 -0.0 -0.1
ypd buoyancy 40 hrs No Buoyancy Separation -0.4 +0.6 -0.6 -1.1 -0.5
growth on ricinoleic acid YNB Methylricinoleic Acid -0.8 -0.3 -0.4 -0.1 -0.3
growth on oleic acid YNB Glucose -0.5 +0.3 -0.1 -0.3 -0.6
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 -0.3 -0.1 -0.6 -0.2
auxotrophy YNB Glucose 75mM Arginine -0.2 -0.2 -0.6 +0.2 -0.3
growth on oleic acid YNB Oleic Acid -0.3 -0.1 +0.1 -0.1 -0.4
growth on ricinoleic acid YNB Glucose -0.4 -0.2 +0.1 -0.2 +0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.2 +0.0 +0.2 -0.5 -0.3
ypd buoyancy 40 hrs Median Buoyancy -0.1 -0.0 -0.2 -0.2 -0.0
auxotrophy Dropout Complete -0.1 -0.1 -0.3 +0.2 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.4 -0.1 +0.5 -0.2 -0.3
ypd buoyancy 40 hrs Low Buoyancy -0.1 +0.0 -0.1 -0.1 -0.2
auxotrophy YNB Glucose 75mM Methionine -0.2 -0.0 -0.1 +0.2 -0.2
growth on ypd YPD +0.1 -0.2 +0.0 -0.2 -0.1
ypd buoyancy 40 hrs High Buoyancy +0.2 +0.0 -0.4 -0.0 +0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.0 +0.1 +0.3 -0.4 -0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.1 +0.1 +0.1 +0.1 -0.2
auxotrophy YNB Glucose -0.1 -0.1 -0.1 +0.3 +0.2
facs on lipid accumulation Sorted High BODIPY Gate +0.2 -0.0 +0.1 +0.2 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate +0.2 +0.0 -0.0 +0.5 -0.1
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