Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 15529 and 15530 are separated by 1059 nucleotides15530 and 15531 are separated by 175 nucleotides15531 and 15532 are separated by 141 nucleotides15532 and 15533 are separated by 114 nucleotides mRNA_7161: 15529 - Hypothetical Protein, at 1,022,593 to 1,024,140 15529 mRNA_7162: 15530 - ProSiteProfiles-Zinc finger C3H1-type profile.-PS50103, at 1,025,200 to 1,027,264 15530 mRNA_7163: 15531 - Hypothetical Protein, at 1,027,440 to 1,028,287 15531 mRNA_7164: 15532 - K13117 DHX35 ATP-dependent RNA helicase DDX35, at 1,028,429 to 1,031,367 15532 mRNA_7165: 15533 - K01867 WARS, trpS tryptophanyl-tRNA synthetase, at 1,031,482 to 1,033,004 15533
Group Condition mRNA_7161 mRNA_7162 mRNA_7163 mRNA_7164 mRNA_7165
15529 15530 15531 15532 15533
ypd buoyancy 40 hrs No Buoyancy Separation -0.6 -1.1 -0.5 -0.2 N.D.
growth on oleic acid YNB Glucose -0.1 -0.3 -0.6 -0.2 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid -0.7 -0.0 -0.1 -0.2 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 -0.6 -0.2 -0.1 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.2 -0.5 -0.3 -0.3 N.D.
auxotrophy YNB Glucose 75mM Arginine -0.6 +0.2 -0.3 -0.0 N.D.
growth on oleic acid YNB Oleic Acid +0.1 -0.1 -0.4 -0.2 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid -0.4 -0.1 -0.3 +0.1 N.D.
growth on ypd YPD +0.0 -0.2 -0.1 -0.2 N.D.
auxotrophy Dropout Complete -0.3 +0.2 -0.1 -0.1 N.D.
ypd buoyancy 40 hrs Median Buoyancy -0.2 -0.2 -0.0 +0.1 N.D.
ypd buoyancy 40 hrs High Buoyancy -0.4 -0.0 +0.0 +0.1 N.D.
ypd buoyancy 40 hrs Low Buoyancy -0.1 -0.1 -0.2 +0.1 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.3 -0.4 -0.1 +0.1 N.D.
auxotrophy YNB Glucose 75mM Methionine -0.1 +0.2 -0.2 -0.0 N.D.
facs on lipid accumulation Sorted No BODIPY Gate +0.1 +0.1 -0.2 -0.1 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.5 -0.2 -0.3 -0.0 N.D.
growth on ricinoleic acid YNB Glucose +0.1 -0.2 +0.0 +0.1 N.D.
auxotrophy YNB Glucose -0.1 +0.3 +0.2 -0.1 N.D.
facs on lipid accumulation Sorted High BODIPY Gate +0.1 +0.2 -0.1 +0.2 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate -0.0 +0.5 -0.1 +0.2 N.D.
remove
mRNA_7161
plot
remove
mRNA_7162
plot
remove
mRNA_7163
remove
mRNA_7164
plot
remove
mRNA_7165
plot