Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
15531 and 15532 are separated by 141 nucleotides
15532 and 15533 are separated by 114 nucleotides
15533 and 15534 are separated by 152 nucleotides
15534 and 15535 are separated by 177 nucleotides
mRNA_7163: 15531 - Hypothetical Protein, at 1,027,440 to 1,028,287
15531
mRNA_7164: 15532 - K13117 DHX35 ATP-dependent RNA helicase DDX35, at 1,028,429 to 1,031,367
15532
mRNA_7165: 15533 - K01867 WARS, trpS tryptophanyl-tRNA synthetase, at 1,031,482 to 1,033,004
15533
mRNA_7166: 15534 - K01626 E2.5.1.54, aroF, aroG, aroH 3-deoxy-7-phosphoheptulonate synthase, at 1,033,157 to 1,035,237
15534
mRNA_7167: 15535 - ProSiteProfiles-Zinc finger C3H1-type profile.-PS50103, at 1,035,415 to 1,036,383
15535
Group
Condition
mRNA
_7163
mRNA
_7164
mRNA
_7165
mRNA
_7166
mRNA
_7167
15531
15532
15533
15534
15535
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.1
-0.2
N.D.
-0.9
-0.5
facs on lipid accumulation
Sorted No BODIPY Gate
-0.2
-0.1
N.D.
-0.2
-0.7
growth on oleic acid
YNB Oleic Acid
-0.4
-0.2
N.D.
-0.2
-0.3
growth on oleic acid
YNB Glucose
-0.6
-0.2
N.D.
+0.0
-0.3
ypd buoyancy
40 hrs No Buoyancy Separation
-0.5
-0.2
N.D.
+0.2
-0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.3
+0.1
N.D.
-0.4
-0.2
growth on ricinoleic acid
YNB Glucose
+0.0
+0.1
N.D.
-0.3
-0.4
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.3
-0.3
N.D.
+0.1
+0.1
auxotrophy
YNB Glucose 75mM Arginine
-0.3
-0.0
N.D.
-0.1
+0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.3
-0.0
N.D.
+0.2
-0.2
auxotrophy
Dropout Complete
-0.1
-0.1
N.D.
-0.1
+0.0
growth on ypd
YPD
-0.1
-0.2
N.D.
-0.1
+0.1
facs on lipid accumulation
Sorted High BODIPY Gate
-0.1
+0.2
N.D.
-0.3
-0.1
auxotrophy
YNB Glucose 75mM Methionine
-0.2
-0.0
N.D.
+0.2
+0.0
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.2
-0.1
N.D.
+0.2
+0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.1
+0.1
N.D.
+0.1
+0.0
ypd buoyancy
40 hrs Low Buoyancy
-0.2
+0.1
N.D.
+0.2
+0.0
ypd buoyancy
40 hrs High Buoyancy
+0.0
+0.1
N.D.
+0.3
-0.2
auxotrophy
YNB Glucose
+0.2
-0.1
N.D.
+0.2
+0.1
ypd buoyancy
40 hrs Median Buoyancy
-0.0
+0.1
N.D.
+0.4
+0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.1
+0.2
N.D.
+0.2
+0.4
remove
mRNA_7163
plot
remove
mRNA_7164
plot
remove
mRNA_7165
remove
mRNA_7166
plot
remove
mRNA_7167
plot