Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 15546 and 15547 are separated by 404 nucleotides15547 and 15548 are separated by 829 nucleotides15548 and 15549 are separated by 495 nucleotides15549 and 15550 are separated by 251 nucleotides mRNA_7178: 15546 - KOG0417 Ubiquitin-protein ligase, at 1,058,838 to 1,059,935 15546 mRNA_7179: 15547 - Hypothetical Protein, at 1,060,340 to 1,061,881 15547 mRNA_7180: 15548 - Hypothetical Protein, at 1,062,711 to 1,064,267 15548 mRNA_7181: 15549 - BLAST expressed protein [Cryptococcus neoformans var. neofo..., at 1,064,763 to 1,065,253 15549 mRNA_7182: 15550 - HMMPfam-WD domain, G-beta repeat-PF00400,ProSitePatterns-Trp-Asp (WD) repeats signature.-PS00678,ProSiteProfiles-Trp-Asp (WD) repeats profile.-PS50082,ProSiteProfiles-Trp-Asp (WD) repeats circular profile.-PS50294,SMART-WD40 repeats-SM00320,SUPERFAMILY--SSF50978, at 1,065,505 to 1,067,037 15550
Group Condition mRNA_7178 mRNA_7179 mRNA_7180 mRNA_7181 mRNA_7182
15546 15547 15548 15549 15550
facs on lipid accumulation Sorted No BODIPY Gate -2.6 -0.3 +0.5 +0.0 -0.6
facs on lipid accumulation Sorted Low BODIPY Gate -4.0 +0.2 +0.3 +0.5 +0.1
ypd buoyancy 40 hrs No Buoyancy Separation -2.1 -0.2 -0.4 +0.1 +0.0
auxotrophy YNB Glucose 75mM Methionine -1.4 +0.2 +0.0 -0.0 -0.3
growth on oleic acid YNB Glucose -0.8 +0.0 -0.0 -0.3 -0.3
ypd buoyancy 40 hrs Low Buoyancy -0.9 -0.0 -0.1 +0.0 -0.1
ypd buoyancy 40 hrs Median Buoyancy -0.2 -0.6 -0.2 +0.4 -0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.8 -0.4 -0.0 +0.1 +0.4
growth on ricinoleic acid YNB Methylricinoleic Acid -1.4 -0.1 +0.7 +0.2 -0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2 -0.7 +0.0 -0.0 +0.2
facs on lipid accumulation Sorted High BODIPY Gate -1.4 +0.5 +0.5 +0.2 -0.5
ypd buoyancy 40 hrs High Buoyancy -0.8 -0.2 -0.0 +0.4 +0.3
growth on oleic acid YNB Oleic Acid -0.2 +0.2 +0.0 -0.2 -0.1
growth on ypd YPD +0.4 -0.0 +0.0 -0.1 -0.6
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.4 -0.3 +0.4 -0.0 +0.2
auxotrophy YNB Glucose -1.0 +0.3 +0.5 +0.2 -0.0
growth on ricinoleic acid YNB Ricinoleic Acid -0.6 -0.1 +0.9 -0.1 -0.1
auxotrophy Dropout Complete -0.9 +0.2 +0.4 +0.1 +0.3
auxotrophy YNB Glucose 75mM Arginine -0.8 +0.5 +0.3 +0.0 +0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.1 -0.2 -0.1 -0.1 +0.5
growth on ricinoleic acid YNB Glucose -0.4 +0.2 +0.6 +0.0 -0.1
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