Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 15549 and 15550 are separated by 251 nucleotides15550 and 15551 are separated by 1117 nucleotides15551 and 15552 are separated by 520 nucleotides15552 and 15553 are separated by 140 nucleotides mRNA_7181: 15549 - BLAST expressed protein [Cryptococcus neoformans var. neofo..., at 1,064,763 to 1,065,253 15549 mRNA_7182: 15550 - HMMPfam-WD domain, G-beta repeat-PF00400,ProSitePatterns-Trp-Asp (WD) repeats signature.-PS00678,ProSiteProfiles-Trp-Asp (WD) repeats profile.-PS50082,ProSiteProfiles-Trp-Asp (WD) repeats circular profile.-PS50294,SMART-WD40 repeats-SM00320,SUPERFAMILY--SSF50978, at 1,065,505 to 1,067,037 15550 mRNA_7183: 15551 - Hypothetical Protein, at 1,068,155 to 1,071,791 15551 mRNA_7184: 15552 - K02219 CKS1 cyclin-dependent kinase regulatory subunit CKS1, at 1,072,312 to 1,073,593 15552 mRNA_7185: 15553 - K07300 chaA, CAX Ca2+-H+ antiporter, at 1,073,734 to 1,075,504 15553
Group Condition mRNA_7181 mRNA_7182 mRNA_7183 mRNA_7184 mRNA_7185
15549 15550 15551 15552 15553
facs on lipid accumulation Sorted No BODIPY Gate +0.0 -0.6 -0.1 -0.2 -1.2
facs on lipid accumulation Sorted High BODIPY Gate +0.2 -0.5 -0.1 -0.0 -1.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 -0.1 +0.1 -0.6 -0.3
growth on oleic acid YNB Glucose -0.3 -0.3 -0.1 -0.1 -0.2
growth on ypd YPD -0.1 -0.6 -0.3 +0.6 +0.0
growth on oleic acid YNB Oleic Acid -0.2 -0.1 +0.1 -0.1 -0.0
facs on lipid accumulation Sorted Low BODIPY Gate +0.5 +0.1 -0.0 -0.5 -0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.0 +0.2 -0.0 -0.1 -0.4
auxotrophy YNB Glucose 75mM Arginine +0.0 +0.1 -0.0 +0.0 -0.2
auxotrophy YNB Glucose 75mM Methionine -0.0 -0.3 -0.0 -0.0 +0.3
auxotrophy Dropout Complete +0.1 +0.3 -0.3 +0.0 -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid +0.2 -0.0 +0.1 -0.4 +0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.0 +0.2 +0.0 +0.1 -0.2
growth on ricinoleic acid YNB Glucose +0.0 -0.1 +0.1 -0.1 +0.1
auxotrophy YNB Glucose +0.2 -0.0 -0.0 +0.2 -0.3
ypd buoyancy 40 hrs Median Buoyancy +0.4 -0.2 -0.1 -0.2 +0.4
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 +0.5 -0.1 -0.4 +0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.1 +0.4 -0.2 +0.1 -0.1
ypd buoyancy 40 hrs Low Buoyancy +0.0 -0.1 +0.1 -0.1 +0.4
ypd buoyancy 40 hrs No Buoyancy Separation +0.1 +0.0 +0.0 -0.0 +0.2
ypd buoyancy 40 hrs High Buoyancy +0.4 +0.3 -0.0 -0.1 +0.4
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