Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
15554 and 15555 are separated by 1287 nucleotides
15555 and 15556 are separated by 309 nucleotides
15556 and 15557 are separated by 306 nucleotides
15557 and 15558 are separated by 265 nucleotides
mRNA_7186: 15554 - HMMPfam-alpha/beta hydrolase fold-PF07859,SUPERFAMILY--SSF53474, at 1,076,175 to 1,077,434
15554
mRNA_7187: 15555 - K00799 GST, gst glutathione S-transferase, at 1,078,722 to 1,079,084
15555
mRNA_7188: 15556 - K01870 IARS, ileS isoleucyl-tRNA synthetase, at 1,079,394 to 1,083,450
15556
mRNA_7189: 15557 - K14847 RPF2 ribosome production factor 2, at 1,083,757 to 1,085,072
15557
mRNA_7190: 15558 - Hypothetical Protein, at 1,085,338 to 1,086,300
15558
Group
Condition
mRNA
_7186
mRNA
_7187
mRNA
_7188
mRNA
_7189
mRNA
_7190
15554
15555
15556
15557
15558
auxotrophy
Dropout Complete
-0.6
-0.7
N.D.
N.D.
-0.2
auxotrophy
YNB Glucose 75mM Methionine
-0.6
-0.2
N.D.
N.D.
-0.6
facs on lipid accumulation
Sorted No BODIPY Gate
-0.3
-0.1
N.D.
N.D.
-1.0
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-1.1
+0.3
N.D.
N.D.
-0.5
ypd buoyancy
40 hrs Low Buoyancy
-0.6
-0.2
N.D.
N.D.
-0.3
auxotrophy
YNB Glucose 75mM Arginine
+0.0
-0.7
N.D.
N.D.
-0.3
auxotrophy
YNB Glucose
-0.2
-0.5
N.D.
N.D.
-0.3
facs on lipid accumulation
Sorted High BODIPY Gate
-0.2
-0.3
N.D.
N.D.
-0.2
growth on oleic acid
YNB Glucose
-0.2
+0.2
N.D.
N.D.
-0.6
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.3
-0.5
N.D.
N.D.
+0.3
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.7
+0.5
N.D.
N.D.
-0.3
ypd buoyancy
40 hrs Median Buoyancy
-0.3
-0.1
N.D.
N.D.
+0.0
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.3
+0.7
N.D.
N.D.
-0.6
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.3
+0.2
N.D.
N.D.
-0.2
growth on oleic acid
YNB Oleic Acid
-0.1
-0.3
N.D.
N.D.
+0.5
ypd buoyancy
40 hrs High Buoyancy
-0.2
+0.7
N.D.
N.D.
-0.1
growth on ypd
YPD
-0.0
+0.6
N.D.
N.D.
+0.0
growth on ricinoleic acid
YNB Glucose
-0.0
+0.3
N.D.
N.D.
+0.3
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.2
+0.3
N.D.
N.D.
+0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.1
+0.7
N.D.
N.D.
+0.5
ypd buoyancy
40 hrs No Buoyancy Separation
-0.6
+0.9
N.D.
N.D.
+0.8
remove
mRNA_7186
plot
remove
mRNA_7187
plot
remove
mRNA_7188
remove
mRNA_7189
plot
remove
mRNA_7190
plot