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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
15555 and 15556 are separated by 309 nucleotides
15556 and 15557 are separated by 306 nucleotides
15557 and 15558 are separated by 265 nucleotides
15558 and 15559 are separated by 356 nucleotides
mRNA_7187: 15555 - K00799 GST, gst glutathione S-transferase, at 1,078,722 to 1,079,084
15555
mRNA_7188: 15556 - K01870 IARS, ileS isoleucyl-tRNA synthetase, at 1,079,394 to 1,083,450
15556
mRNA_7189: 15557 - K14847 RPF2 ribosome production factor 2, at 1,083,757 to 1,085,072
15557
mRNA_7190: 15558 - Hypothetical Protein, at 1,085,338 to 1,086,300
15558
mRNA_7191: 15559 - Hypothetical Protein, at 1,086,657 to 1,088,494
15559
Group
Condition
mRNA
_7187
mRNA
_7188
mRNA
_7189
mRNA
_7190
mRNA
_7191
15555
15556
15557
15558
15559
facs on lipid accumulation
Sorted No BODIPY Gate
-0.1
N.D.
N.D.
-1.0
-0.3
auxotrophy
Dropout Complete
-0.7
N.D.
N.D.
-0.2
-0.4
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.3
N.D.
N.D.
-0.5
-0.9
growth on oleic acid
YNB Glucose
+0.2
N.D.
N.D.
-0.6
-0.7
auxotrophy
YNB Glucose 75mM Methionine
-0.2
N.D.
N.D.
-0.6
-0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.5
N.D.
N.D.
+0.3
-0.7
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.2
N.D.
N.D.
-0.2
-0.8
auxotrophy
YNB Glucose 75mM Arginine
-0.7
N.D.
N.D.
-0.3
+0.3
auxotrophy
YNB Glucose
-0.5
N.D.
N.D.
-0.3
+0.3
ypd buoyancy
40 hrs Low Buoyancy
-0.2
N.D.
N.D.
-0.3
+0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.7
N.D.
N.D.
-0.6
-0.3
facs on lipid accumulation
Sorted High BODIPY Gate
-0.3
N.D.
N.D.
-0.2
+0.3
growth on ypd
YPD
+0.6
N.D.
N.D.
+0.0
-0.8
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.5
N.D.
N.D.
-0.3
-0.2
ypd buoyancy
40 hrs Median Buoyancy
-0.1
N.D.
N.D.
+0.0
+0.2
ypd buoyancy
40 hrs No Buoyancy Separation
+0.9
N.D.
N.D.
+0.8
-1.0
ypd buoyancy
40 hrs High Buoyancy
+0.7
N.D.
N.D.
-0.1
+0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.3
N.D.
N.D.
+0.1
+0.4
growth on oleic acid
YNB Oleic Acid
-0.3
N.D.
N.D.
+0.5
+1.0
growth on ricinoleic acid
YNB Glucose
+0.3
N.D.
N.D.
+0.3
+0.9
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.7
N.D.
N.D.
+0.5
+0.8
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