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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
15557 and 15558 are separated by 265 nucleotides
15558 and 15559 are separated by 356 nucleotides
15559 and 15560 are separated by 277 nucleotides
15560 and 15561 are separated by 859 nucleotides
mRNA_7189: 15557 - K14847 RPF2 ribosome production factor 2, at 1,083,757 to 1,085,072
15557
mRNA_7190: 15558 - Hypothetical Protein, at 1,085,338 to 1,086,300
15558
mRNA_7191: 15559 - Hypothetical Protein, at 1,086,657 to 1,088,494
15559
mRNA_7192: 15560 - Hypothetical Protein, at 1,088,772 to 1,091,031
15560
mRNA_7193: 15561 - K03678 RRP45, EXOSC9 exosome complex component RRP45, at 1,091,891 to 1,093,190
15561
Group
Condition
mRNA
_7189
mRNA
_7190
mRNA
_7191
mRNA
_7192
mRNA
_7193
15557
15558
15559
15560
15561
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
N.D.
-0.5
-0.9
N.D.
N.D.
facs on lipid accumulation
Sorted No BODIPY Gate
N.D.
-1.0
-0.3
N.D.
N.D.
growth on oleic acid
YNB Glucose
N.D.
-0.6
-0.7
N.D.
N.D.
facs on lipid accumulation
Sorted Low BODIPY Gate
N.D.
-0.2
-0.8
N.D.
N.D.
buoyancy on lipid accumulation
40 hrs Low Buoyancy
N.D.
-0.6
-0.3
N.D.
N.D.
auxotrophy
YNB Glucose 75mM Methionine
N.D.
-0.6
-0.1
N.D.
N.D.
growth on ypd
YPD
N.D.
+0.0
-0.8
N.D.
N.D.
auxotrophy
Dropout Complete
N.D.
-0.2
-0.4
N.D.
N.D.
buoyancy on lipid accumulation
40 hrs Median Buoyancy
N.D.
-0.3
-0.2
N.D.
N.D.
buoyancy on lipid accumulation
40 hrs High Buoyancy
N.D.
+0.3
-0.7
N.D.
N.D.
ypd buoyancy
40 hrs No Buoyancy Separation
N.D.
+0.8
-1.0
N.D.
N.D.
ypd buoyancy
40 hrs Low Buoyancy
N.D.
-0.3
+0.1
N.D.
N.D.
auxotrophy
YNB Glucose
N.D.
-0.3
+0.3
N.D.
N.D.
auxotrophy
YNB Glucose 75mM Arginine
N.D.
-0.3
+0.3
N.D.
N.D.
ypd buoyancy
40 hrs High Buoyancy
N.D.
-0.1
+0.1
N.D.
N.D.
facs on lipid accumulation
Sorted High BODIPY Gate
N.D.
-0.2
+0.3
N.D.
N.D.
ypd buoyancy
40 hrs Median Buoyancy
N.D.
+0.0
+0.2
N.D.
N.D.
growth on ricinoleic acid
YNB Methylricinoleic Acid
N.D.
+0.1
+0.4
N.D.
N.D.
growth on ricinoleic acid
YNB Glucose
N.D.
+0.3
+0.9
N.D.
N.D.
growth on ricinoleic acid
YNB Ricinoleic Acid
N.D.
+0.5
+0.8
N.D.
N.D.
growth on oleic acid
YNB Oleic Acid
N.D.
+0.5
+1.0
N.D.
N.D.
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