Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 15559 and 15560 are separated by 277 nucleotides15560 and 15561 are separated by 859 nucleotides15561 and 15562 are separated by 371 nucleotides15562 and 15563 are separated by 189 nucleotides mRNA_7191: 15559 - Hypothetical Protein, at 1,086,657 to 1,088,494 15559 mRNA_7192: 15560 - Hypothetical Protein, at 1,088,772 to 1,091,031 15560 mRNA_7193: 15561 - K03678 RRP45, EXOSC9 exosome complex component RRP45, at 1,091,891 to 1,093,190 15561 mRNA_7194: 15562 - K12831 SF3B4, SAP49 splicing factor 3B subunit 4, at 1,093,562 to 1,094,787 15562 mRNA_7195: 15563 - KOG0519 Sensory transduction histidine kinase, at 1,094,977 to 1,103,696 15563
Group Condition mRNA_7191 mRNA_7192 mRNA_7193 mRNA_7194 mRNA_7195
15559 15560 15561 15562 15563
facs on lipid accumulation Sorted Low BODIPY Gate -0.8 N.D. N.D. N.D. -1.5
facs on lipid accumulation Sorted No BODIPY Gate -0.3 N.D. N.D. N.D. -1.1
auxotrophy Dropout Complete -0.4 N.D. N.D. N.D. -0.7
ypd buoyancy 40 hrs Low Buoyancy +0.1 N.D. N.D. N.D. -1.0
growth on oleic acid YNB Glucose -0.7 N.D. N.D. N.D. -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.7 N.D. N.D. N.D. -0.2
ypd buoyancy 40 hrs No Buoyancy Separation -1.0 N.D. N.D. N.D. +0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.9 N.D. N.D. N.D. -0.0
growth on ypd YPD -0.8 N.D. N.D. N.D. -0.0
growth on ricinoleic acid YNB Ricinoleic Acid +0.8 N.D. N.D. N.D. -1.4
growth on ricinoleic acid YNB Methylricinoleic Acid +0.4 N.D. N.D. N.D. -1.0
auxotrophy YNB Glucose 75mM Methionine -0.1 N.D. N.D. N.D. -0.3
auxotrophy YNB Glucose +0.3 N.D. N.D. N.D. -0.6
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.3 N.D. N.D. N.D. +0.1
facs on lipid accumulation Sorted High BODIPY Gate +0.3 N.D. N.D. N.D. -0.6
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2 N.D. N.D. N.D. +0.1
growth on ricinoleic acid YNB Glucose +0.9 N.D. N.D. N.D. -1.0
auxotrophy YNB Glucose 75mM Arginine +0.3 N.D. N.D. N.D. -0.4
ypd buoyancy 40 hrs High Buoyancy +0.1 N.D. N.D. N.D. +0.3
ypd buoyancy 40 hrs Median Buoyancy +0.2 N.D. N.D. N.D. +0.2
growth on oleic acid YNB Oleic Acid +1.0 N.D. N.D. N.D. +0.0
remove
mRNA_7191
plot		 remove
mRNA_7192
plot		 remove
mRNA_7193		 remove
mRNA_7194
plot		 remove
mRNA_7195
plot