Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 15561 and 15562 are separated by 371 nucleotides15562 and 15563 are separated by 189 nucleotides15563 and 15564 are separated by 334 nucleotides15564 and 15565 are separated by 507 nucleotides mRNA_7193: 15561 - K03678 RRP45, EXOSC9 exosome complex component RRP45, at 1,091,891 to 1,093,190 15561 mRNA_7194: 15562 - K12831 SF3B4, SAP49 splicing factor 3B subunit 4, at 1,093,562 to 1,094,787 15562 mRNA_7195: 15563 - KOG0519 Sensory transduction histidine kinase, at 1,094,977 to 1,103,696 15563 mRNA_7196: 15564 - KOG3329 RAN guanine nucleotide release factor, at 1,104,031 to 1,104,798 15564 mRNA_7197: 15565 - KOG0490 Transcription factor, contains HOX domain, at 1,105,306 to 1,105,458 15565
Group Condition mRNA_7193 mRNA_7194 mRNA_7195 mRNA_7196 mRNA_7197
15561 15562 15563 15564 15565
growth on ricinoleic acid YNB Ricinoleic Acid N.D. N.D. -1.4 N.D. -2.3
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. N.D. -1.0 N.D. -1.7
facs on lipid accumulation Sorted Low BODIPY Gate N.D. N.D. -1.5 N.D. -0.9
auxotrophy Dropout Complete N.D. N.D. -0.7 N.D. -1.3
growth on ricinoleic acid YNB Glucose N.D. N.D. -1.0 N.D. -0.6
auxotrophy YNB Glucose 75mM Methionine N.D. N.D. -0.3 N.D. -1.2
facs on lipid accumulation Sorted No BODIPY Gate N.D. N.D. -1.1 N.D. -0.3
auxotrophy YNB Glucose N.D. N.D. -0.6 N.D. -0.7
auxotrophy YNB Glucose 75mM Arginine N.D. N.D. -0.4 N.D. -0.9
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. N.D. +0.1 N.D. -1.2
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. N.D. -0.2 N.D. -0.7
growth on ypd YPD N.D. N.D. -0.0 N.D. -0.5
growth on oleic acid YNB Oleic Acid N.D. N.D. +0.0 N.D. -0.3
ypd buoyancy 40 hrs Low Buoyancy N.D. N.D. -1.0 N.D. +0.9
growth on oleic acid YNB Glucose N.D. N.D. -0.2 N.D. +0.1
ypd buoyancy 40 hrs No Buoyancy Separation N.D. N.D. +0.1 N.D. -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. N.D. +0.1 N.D. +0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. N.D. -0.0 N.D. +0.7
facs on lipid accumulation Sorted High BODIPY Gate N.D. N.D. -0.6 N.D. +1.3
ypd buoyancy 40 hrs High Buoyancy N.D. N.D. +0.3 N.D. +0.9
ypd buoyancy 40 hrs Median Buoyancy N.D. N.D. +0.2 N.D. +1.2
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