Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
15562 and 15563 are separated by 189 nucleotides
15563 and 15564 are separated by 334 nucleotides
15564 and 15565 are separated by 507 nucleotides
15565 and 15566 are separated by 2182 nucleotides
mRNA_7194: 15562 - K12831 SF3B4, SAP49 splicing factor 3B subunit 4, at 1,093,562 to 1,094,787
15562
mRNA_7195: 15563 - KOG0519 Sensory transduction histidine kinase, at 1,094,977 to 1,103,696
15563
mRNA_7196: 15564 - KOG3329 RAN guanine nucleotide release factor, at 1,104,031 to 1,104,798
15564
mRNA_7197: 15565 - KOG0490 Transcription factor, contains HOX domain, at 1,105,306 to 1,105,458
15565
mRNA_7198: 15566 - Hypothetical Protein, at 1,107,641 to 1,108,204
15566
Group
Condition
mRNA
_7194
mRNA
_7195
mRNA
_7196
mRNA
_7197
mRNA
_7198
15562
15563
15564
15565
15566
growth on ricinoleic acid
YNB Ricinoleic Acid
N.D.
-1.4
N.D.
-2.3
-0.3
facs on lipid accumulation
Sorted Low BODIPY Gate
N.D.
-1.5
N.D.
-0.9
-0.7
growth on ricinoleic acid
YNB Methylricinoleic Acid
N.D.
-1.0
N.D.
-1.7
-0.1
growth on ricinoleic acid
YNB Glucose
N.D.
-1.0
N.D.
-0.6
-0.2
auxotrophy
YNB Glucose
N.D.
-0.6
N.D.
-0.7
-0.3
facs on lipid accumulation
Sorted No BODIPY Gate
N.D.
-1.1
N.D.
-0.3
+0.0
auxotrophy
Dropout Complete
N.D.
-0.7
N.D.
-1.3
+0.6
auxotrophy
YNB Glucose 75mM Methionine
N.D.
-0.3
N.D.
-1.2
+0.1
auxotrophy
YNB Glucose 75mM Arginine
N.D.
-0.4
N.D.
-0.9
+0.3
buoyancy on lipid accumulation
40 hrs High Buoyancy
N.D.
-0.2
N.D.
-0.7
+0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
N.D.
+0.1
N.D.
-1.2
+0.5
ypd buoyancy
40 hrs Low Buoyancy
N.D.
-1.0
N.D.
+0.9
-0.3
growth on oleic acid
YNB Oleic Acid
N.D.
+0.0
N.D.
-0.3
+0.2
growth on ypd
YPD
N.D.
-0.0
N.D.
-0.5
+0.6
ypd buoyancy
40 hrs No Buoyancy Separation
N.D.
+0.1
N.D.
-0.1
+0.1
facs on lipid accumulation
Sorted High BODIPY Gate
N.D.
-0.6
N.D.
+1.3
-0.5
growth on oleic acid
YNB Glucose
N.D.
-0.2
N.D.
+0.1
+0.6
ypd buoyancy
40 hrs High Buoyancy
N.D.
+0.3
N.D.
+0.9
-0.7
buoyancy on lipid accumulation
40 hrs Low Buoyancy
N.D.
+0.1
N.D.
+0.4
+0.3
ypd buoyancy
40 hrs Median Buoyancy
N.D.
+0.2
N.D.
+1.2
-0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
N.D.
-0.0
N.D.
+0.7
+0.9
remove
mRNA_7194
plot
remove
mRNA_7195
plot
remove
mRNA_7196
remove
mRNA_7197
plot
remove
mRNA_7198
plot