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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
15570 and 15571 are separated by 418 nucleotides
15571 and 15572 are separated by 397 nucleotides
15572 and 15573 are separated by 493 nucleotides
15573 and 15574 are separated by 220 nucleotides
mRNA_7202: 15570 - BLAST expressed protein [Schizophyllum commune H4-8], at 1,114,598 to 1,116,193
15570
mRNA_7203: 15571 - SUPERFAMILY--SSF52047, at 1,116,612 to 1,117,999
15571
mRNA_7204: 15572 - HMMPfam-F-box-like-PF12937,ProSiteProfiles-F-box domain profile.-PS50181,SUPERFAMILY--SSF52047,SUPERFAMILY--SSF81383, at 1,118,397 to 1,120,170
15572
mRNA_7205: 15573 - Hypothetical Protein, at 1,120,664 to 1,121,084
15573
mRNA_7206: 15574 - BLAST checkpoint 9-1-1 complex, HUS1 component [Moesziomyce..., at 1,121,305 to 1,122,113
15574
Group
Condition
mRNA
_7202
mRNA
_7203
mRNA
_7204
mRNA
_7205
mRNA
_7206
15570
15571
15572
15573
15574
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.2
+0.1
-1.2
-0.2
-1.3
ypd buoyancy
40 hrs No Buoyancy Separation
-0.3
-0.4
+0.0
+0.3
-1.5
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.1
-0.4
-0.3
-0.8
-0.1
auxotrophy
YNB Glucose 75mM Methionine
-0.1
-0.0
-0.1
-0.6
-0.5
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.0
+0.0
-0.5
-0.6
-0.2
growth on ricinoleic acid
YNB Glucose
+0.1
-0.1
-0.5
-0.4
-0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.1
-0.7
-0.2
-0.1
+0.3
facs on lipid accumulation
Sorted No BODIPY Gate
-0.2
+0.0
-0.6
+0.2
+0.0
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.1
-0.5
-0.2
-0.2
+0.5
growth on ypd
YPD
+0.2
-0.1
-0.5
+0.3
-0.4
growth on oleic acid
YNB Glucose
-0.0
+0.0
-0.0
-0.1
-0.3
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.1
+0.5
-0.2
-0.4
-0.3
facs on lipid accumulation
Sorted High BODIPY Gate
+0.1
-0.5
-0.0
-0.0
+0.2
auxotrophy
Dropout Complete
+0.0
-0.1
+0.0
-0.3
+0.1
ypd buoyancy
40 hrs Median Buoyancy
+0.1
+0.1
+0.1
-0.0
-0.4
growth on oleic acid
YNB Oleic Acid
-0.0
-0.0
-0.4
-0.0
+0.4
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.0
-0.4
-0.1
-0.1
+0.5
auxotrophy
YNB Glucose
+0.2
-0.0
+0.1
-0.2
-0.1
auxotrophy
YNB Glucose 75mM Arginine
+0.0
-0.2
+0.2
-0.0
+0.1
ypd buoyancy
40 hrs High Buoyancy
-0.2
+0.3
-0.2
+0.2
+0.1
ypd buoyancy
40 hrs Low Buoyancy
-0.1
+0.4
+0.0
-0.1
+0.1
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