Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
15571 and 15572 are separated by 397 nucleotides
15572 and 15573 are separated by 493 nucleotides
15573 and 15574 are separated by 220 nucleotides
15574 and 15575 are separated by 275 nucleotides
mRNA_7203: 15571 - SUPERFAMILY--SSF52047, at 1,116,612 to 1,117,999
15571
mRNA_7204: 15572 - HMMPfam-F-box-like-PF12937,ProSiteProfiles-F-box domain profile.-PS50181,SUPERFAMILY--SSF52047,SUPERFAMILY--SSF81383, at 1,118,397 to 1,120,170
15572
mRNA_7205: 15573 - Hypothetical Protein, at 1,120,664 to 1,121,084
15573
mRNA_7206: 15574 - BLAST checkpoint 9-1-1 complex, HUS1 component [Moesziomyce..., at 1,121,305 to 1,122,113
15574
mRNA_7207: 15575 - KOG1209 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases, at 1,122,389 to 1,123,916
15575
Group
Condition
mRNA
_7203
mRNA
_7204
mRNA
_7205
mRNA
_7206
mRNA
_7207
15571
15572
15573
15574
15575
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.1
-1.2
-0.2
-1.3
+0.0
ypd buoyancy
40 hrs No Buoyancy Separation
-0.4
+0.0
+0.3
-1.5
-0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.4
-0.3
-0.8
-0.1
+0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.0
-0.5
-0.6
-0.2
+0.1
auxotrophy
YNB Glucose 75mM Methionine
-0.0
-0.1
-0.6
-0.5
+0.0
growth on ricinoleic acid
YNB Glucose
-0.1
-0.5
-0.4
-0.1
+0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.7
-0.2
-0.1
+0.3
+0.1
growth on ypd
YPD
-0.1
-0.5
+0.3
-0.4
+0.2
growth on oleic acid
YNB Glucose
+0.0
-0.0
-0.1
-0.3
-0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.5
-0.2
-0.2
+0.5
+0.1
ypd buoyancy
40 hrs Median Buoyancy
+0.1
+0.1
-0.0
-0.4
-0.0
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.4
-0.1
-0.1
+0.5
-0.2
growth on oleic acid
YNB Oleic Acid
-0.0
-0.4
-0.0
+0.4
-0.2
facs on lipid accumulation
Sorted High BODIPY Gate
-0.5
-0.0
-0.0
+0.2
+0.2
facs on lipid accumulation
Sorted No BODIPY Gate
+0.0
-0.6
+0.2
+0.0
+0.2
auxotrophy
Dropout Complete
-0.1
+0.0
-0.3
+0.1
+0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.5
-0.2
-0.4
-0.3
+0.3
auxotrophy
YNB Glucose
-0.0
+0.1
-0.2
-0.1
+0.2
auxotrophy
YNB Glucose 75mM Arginine
-0.2
+0.2
-0.0
+0.1
-0.1
ypd buoyancy
40 hrs Low Buoyancy
+0.4
+0.0
-0.1
+0.1
-0.1
ypd buoyancy
40 hrs High Buoyancy
+0.3
-0.2
+0.2
+0.1
+0.1
remove
mRNA_7203
plot
remove
mRNA_7204
plot
remove
mRNA_7205
remove
mRNA_7206
plot
remove
mRNA_7207
plot