Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 15571 and 15572 are separated by 397 nucleotides15572 and 15573 are separated by 493 nucleotides15573 and 15574 are separated by 220 nucleotides15574 and 15575 are separated by 275 nucleotides mRNA_7203: 15571 - SUPERFAMILY--SSF52047, at 1,116,612 to 1,117,999 15571 mRNA_7204: 15572 - HMMPfam-F-box-like-PF12937,ProSiteProfiles-F-box domain profile.-PS50181,SUPERFAMILY--SSF52047,SUPERFAMILY--SSF81383, at 1,118,397 to 1,120,170 15572 mRNA_7205: 15573 - Hypothetical Protein, at 1,120,664 to 1,121,084 15573 mRNA_7206: 15574 - BLAST checkpoint 9-1-1 complex, HUS1 component [Moesziomyce..., at 1,121,305 to 1,122,113 15574 mRNA_7207: 15575 - KOG1209 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases, at 1,122,389 to 1,123,916 15575
Group Condition mRNA_7203 mRNA_7204 mRNA_7205 mRNA_7206 mRNA_7207
15571 15572 15573 15574 15575
facs on lipid accumulation Sorted Low BODIPY Gate +0.1 -1.2 -0.2 -1.3 +0.0
ypd buoyancy 40 hrs No Buoyancy Separation -0.4 +0.0 +0.3 -1.5 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.4 -0.3 -0.8 -0.1 +0.2
growth on ricinoleic acid YNB Ricinoleic Acid +0.0 -0.5 -0.6 -0.2 +0.1
auxotrophy YNB Glucose 75mM Methionine -0.0 -0.1 -0.6 -0.5 +0.0
growth on ricinoleic acid YNB Glucose -0.1 -0.5 -0.4 -0.1 +0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.7 -0.2 -0.1 +0.3 +0.1
growth on ypd YPD -0.1 -0.5 +0.3 -0.4 +0.2
growth on oleic acid YNB Glucose +0.0 -0.0 -0.1 -0.3 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.5 -0.2 -0.2 +0.5 +0.1
ypd buoyancy 40 hrs Median Buoyancy +0.1 +0.1 -0.0 -0.4 -0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.4 -0.1 -0.1 +0.5 -0.2
growth on oleic acid YNB Oleic Acid -0.0 -0.4 -0.0 +0.4 -0.2
facs on lipid accumulation Sorted High BODIPY Gate -0.5 -0.0 -0.0 +0.2 +0.2
facs on lipid accumulation Sorted No BODIPY Gate +0.0 -0.6 +0.2 +0.0 +0.2
auxotrophy Dropout Complete -0.1 +0.0 -0.3 +0.1 +0.2
growth on ricinoleic acid YNB Methylricinoleic Acid +0.5 -0.2 -0.4 -0.3 +0.3
auxotrophy YNB Glucose -0.0 +0.1 -0.2 -0.1 +0.2
auxotrophy YNB Glucose 75mM Arginine -0.2 +0.2 -0.0 +0.1 -0.1
ypd buoyancy 40 hrs Low Buoyancy +0.4 +0.0 -0.1 +0.1 -0.1
ypd buoyancy 40 hrs High Buoyancy +0.3 -0.2 +0.2 +0.1 +0.1
remove
mRNA_7203
plot
remove
mRNA_7204
plot
remove
mRNA_7205
remove
mRNA_7206
plot
remove
mRNA_7207
plot