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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
15572 and 15573 are separated by 493 nucleotides
15573 and 15574 are separated by 220 nucleotides
15574 and 15575 are separated by 275 nucleotides
15575 and 15576 are separated by 43 nucleotides
mRNA_7204: 15572 - HMMPfam-F-box-like-PF12937,ProSiteProfiles-F-box domain profile.-PS50181,SUPERFAMILY--SSF52047,SUPERFAMILY--SSF81383, at 1,118,397 to 1,120,170
15572
mRNA_7205: 15573 - Hypothetical Protein, at 1,120,664 to 1,121,084
15573
mRNA_7206: 15574 - BLAST checkpoint 9-1-1 complex, HUS1 component [Moesziomyce..., at 1,121,305 to 1,122,113
15574
mRNA_7207: 15575 - KOG1209 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases, at 1,122,389 to 1,123,916
15575
mRNA_7208: 15576 - K03361 CDC4 F-box and WD-40 domain protein CDC4, at 1,123,960 to 1,127,394
15576
Group
Condition
mRNA
_7204
mRNA
_7205
mRNA
_7206
mRNA
_7207
mRNA
_7208
15572
15573
15574
15575
15576
facs on lipid accumulation
Sorted Low BODIPY Gate
-1.2
-0.2
-1.3
+0.0
-1.5
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.5
-0.6
-0.2
+0.1
-0.2
auxotrophy
YNB Glucose 75mM Methionine
-0.1
-0.6
-0.5
+0.0
-0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.2
-0.2
+0.5
+0.1
-1.5
ypd buoyancy
40 hrs No Buoyancy Separation
+0.0
+0.3
-1.5
-0.1
-0.0
growth on ricinoleic acid
YNB Glucose
-0.5
-0.4
-0.1
+0.1
-0.4
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.3
-0.8
-0.1
+0.2
+0.1
growth on ypd
YPD
-0.5
+0.3
-0.4
+0.2
-0.5
facs on lipid accumulation
Sorted No BODIPY Gate
-0.6
+0.2
+0.0
+0.2
-0.5
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.2
-0.4
-0.3
+0.3
+0.0
auxotrophy
Dropout Complete
+0.0
-0.3
+0.1
+0.2
-0.5
growth on oleic acid
YNB Glucose
-0.0
-0.1
-0.3
-0.1
+0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.1
-0.1
+0.5
-0.2
-0.3
auxotrophy
YNB Glucose
+0.1
-0.2
-0.1
+0.2
-0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.2
-0.1
+0.3
+0.1
-0.2
ypd buoyancy
40 hrs Median Buoyancy
+0.1
-0.0
-0.4
-0.0
+0.3
auxotrophy
YNB Glucose 75mM Arginine
+0.2
-0.0
+0.1
-0.1
-0.2
ypd buoyancy
40 hrs Low Buoyancy
+0.0
-0.1
+0.1
-0.1
+0.4
ypd buoyancy
40 hrs High Buoyancy
-0.2
+0.2
+0.1
+0.1
+0.2
facs on lipid accumulation
Sorted High BODIPY Gate
-0.0
-0.0
+0.2
+0.2
+0.3
growth on oleic acid
YNB Oleic Acid
-0.4
-0.0
+0.4
-0.2
+0.9
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