Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt 15574 and 15575 are separated by 275 nucleotides15575 and 15576 are separated by 43 nucleotides15576 and 15577 are separated by 516 nucleotides15577 and 15578 are separated by 850 nucleotides mRNA_7206: 15574 - BLAST checkpoint 9-1-1 complex, HUS1 component [Moesziomyce..., at 1,121,305 to 1,122,113 15574 mRNA_7207: 15575 - KOG1209 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases, at 1,122,389 to 1,123,916 15575 mRNA_7208: 15576 - K03361 CDC4 F-box and WD-40 domain protein CDC4, at 1,123,960 to 1,127,394 15576 mRNA_7209: 15577 - K01408 IDE, ide insulysin, at 1,127,911 to 1,131,746 15577 mRNA_7210: 15578 - K15271 HFM1, MER3 ATP-dependent DNA helicase HFM1/MER3, at 1,132,597 to 1,139,005 15578
Group Condition mRNA_7206 mRNA_7207 mRNA_7208 mRNA_7209 mRNA_7210
15574 15575 15576 15577 15578
facs on lipid accumulation Sorted Low BODIPY Gate -1.3 +0.0 -1.5 -0.0 -0.0
ypd buoyancy 40 hrs No Buoyancy Separation -1.5 -0.1 -0.0 +0.1 +0.0
auxotrophy YNB Glucose 75mM Methionine -0.5 +0.0 -0.2 -0.1 +0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.5 +0.1 -1.5 +0.4 -0.1
growth on ricinoleic acid YNB Glucose -0.1 +0.1 -0.4 -0.2 +0.0
ypd buoyancy 40 hrs Median Buoyancy -0.4 -0.0 +0.3 -0.2 -0.0
facs on lipid accumulation Sorted No BODIPY Gate +0.0 +0.2 -0.5 +0.0 -0.1
growth on oleic acid YNB Glucose -0.3 -0.1 +0.2 +0.1 -0.0
growth on ypd YPD -0.4 +0.2 -0.5 +0.7 +0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.3 +0.1 -0.2 +0.0 -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.5 -0.2 -0.3 -0.0 -0.1
ypd buoyancy 40 hrs High Buoyancy +0.1 +0.1 +0.2 -0.4 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.2 +0.1 -0.2 +0.1 +0.3
auxotrophy YNB Glucose 75mM Arginine +0.1 -0.1 -0.2 +0.2 +0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.3 +0.3 +0.0 +0.2 -0.1
auxotrophy Dropout Complete +0.1 +0.2 -0.5 +0.2 +0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 +0.2 +0.1 +0.2 -0.2
ypd buoyancy 40 hrs Low Buoyancy +0.1 -0.1 +0.4 -0.1 -0.1
auxotrophy YNB Glucose -0.1 +0.2 -0.2 +0.3 +0.1
facs on lipid accumulation Sorted High BODIPY Gate +0.2 +0.2 +0.3 -0.0 +0.0
growth on oleic acid YNB Oleic Acid +0.4 -0.2 +0.9 -0.0 -0.0
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