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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
15575 and 15576 are separated by 43 nucleotides
15576 and 15577 are separated by 516 nucleotides
15577 and 15578 are separated by 850 nucleotides
15578 and 15579 are separated by 1045 nucleotides
mRNA_7207: 15575 - KOG1209 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases, at 1,122,389 to 1,123,916
15575
mRNA_7208: 15576 - K03361 CDC4 F-box and WD-40 domain protein CDC4, at 1,123,960 to 1,127,394
15576
mRNA_7209: 15577 - K01408 IDE, ide insulysin, at 1,127,911 to 1,131,746
15577
mRNA_7210: 15578 - K15271 HFM1, MER3 ATP-dependent DNA helicase HFM1/MER3, at 1,132,597 to 1,139,005
15578
mRNA_7211: 15579 - HMMPfam-Fungal specific transcription factor domain-PF11951,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,SUPERFAMILY--SSF57701, at 1,140,051 to 1,142,038
15579
Group
Condition
mRNA
_7207
mRNA
_7208
mRNA
_7209
mRNA
_7210
mRNA
_7211
15575
15576
15577
15578
15579
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.0
-1.5
-0.0
-0.0
+0.0
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.1
-1.5
+0.4
-0.1
+0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.2
-0.3
-0.0
-0.1
-0.4
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.1
-0.2
+0.0
-0.2
-0.1
facs on lipid accumulation
Sorted No BODIPY Gate
+0.2
-0.5
+0.0
-0.1
-0.0
growth on ricinoleic acid
YNB Glucose
+0.1
-0.4
-0.2
+0.0
+0.1
ypd buoyancy
40 hrs High Buoyancy
+0.1
+0.2
-0.4
-0.1
-0.1
ypd buoyancy
40 hrs Median Buoyancy
-0.0
+0.3
-0.2
-0.0
-0.2
growth on oleic acid
YNB Glucose
-0.1
+0.2
+0.1
-0.0
-0.2
ypd buoyancy
40 hrs Low Buoyancy
-0.1
+0.4
-0.1
-0.1
-0.0
auxotrophy
YNB Glucose 75mM Arginine
-0.1
-0.2
+0.2
+0.1
+0.1
auxotrophy
YNB Glucose 75mM Methionine
+0.0
-0.2
-0.1
+0.1
+0.4
ypd buoyancy
40 hrs No Buoyancy Separation
-0.1
-0.0
+0.1
+0.0
+0.2
growth on ypd
YPD
+0.2
-0.5
+0.7
+0.0
-0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.2
+0.1
+0.2
-0.2
-0.0
auxotrophy
Dropout Complete
+0.2
-0.5
+0.2
+0.2
+0.3
facs on lipid accumulation
Sorted High BODIPY Gate
+0.2
+0.3
-0.0
+0.0
+0.0
growth on oleic acid
YNB Oleic Acid
-0.2
+0.9
-0.0
-0.0
-0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.3
+0.0
+0.2
-0.1
+0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.1
-0.2
+0.1
+0.3
+0.4
auxotrophy
YNB Glucose
+0.2
-0.2
+0.3
+0.1
+0.4
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