Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 15578 and 15579 are separated by 1045 nucleotides15579 and 15580 are separated by 458 nucleotides15580 and 15581 are separated by 309 nucleotides15581 and 15582 are separated by 137 nucleotides mRNA_7210: 15578 - K15271 HFM1, MER3 ATP-dependent DNA helicase HFM1/MER3, at 1,132,597 to 1,139,005 15578 mRNA_7211: 15579 - HMMPfam-Fungal specific transcription factor domain-PF11951,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,SUPERFAMILY--SSF57701, at 1,140,051 to 1,142,038 15579 mRNA_7212: 15580 - KOG3764 Vesicular amine transporter, at 1,142,497 to 1,144,513 15580 mRNA_7213: 15581 - K14636 SLC18A3, VACHT MFS transporter, DHA1 family, solute carrier family 18 (vesicular acetylcholine transporter), member 3, at 1,144,823 to 1,146,874 15581 mRNA_7214: 15582 - K17792 TIM54 mitochondrial import inner membrane translocase subunit TIM54, at 1,147,012 to 1,148,920 15582
Group Condition mRNA_7210 mRNA_7211 mRNA_7212 mRNA_7213 mRNA_7214
15578 15579 15580 15581 15582
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 -0.4 -0.1 +0.1 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2 -0.1 -0.0 -0.2 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 -0.0 +0.1 -0.3 N.D.
ypd buoyancy 40 hrs High Buoyancy -0.1 -0.1 -0.1 -0.1 N.D.
growth on ypd YPD +0.0 -0.2 +0.1 -0.3 N.D.
growth on oleic acid YNB Oleic Acid -0.0 -0.1 +0.3 -0.4 N.D.
ypd buoyancy 40 hrs Low Buoyancy -0.1 -0.0 -0.1 +0.0 N.D.
facs on lipid accumulation Sorted No BODIPY Gate -0.1 -0.0 +0.3 -0.3 N.D.
growth on oleic acid YNB Glucose -0.0 -0.2 +0.2 -0.1 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation +0.0 +0.2 -0.0 -0.2 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 +0.2 +0.2 -0.1 N.D.
ypd buoyancy 40 hrs Median Buoyancy -0.0 -0.2 +0.1 +0.2 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate -0.0 +0.0 +0.1 +0.0 N.D.
auxotrophy YNB Glucose 75mM Arginine +0.1 +0.1 -0.0 +0.1 N.D.
auxotrophy YNB Glucose 75mM Methionine +0.1 +0.4 -0.0 -0.0 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 +0.2 +0.0 +0.4 N.D.
auxotrophy YNB Glucose +0.1 +0.4 +0.1 -0.1 N.D.
auxotrophy Dropout Complete +0.2 +0.3 +0.1 -0.1 N.D.
growth on ricinoleic acid YNB Glucose +0.0 +0.1 +0.3 +0.3 N.D.
facs on lipid accumulation Sorted High BODIPY Gate +0.0 +0.0 +0.3 +0.4 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid +0.3 +0.4 +0.3 +0.0 N.D.
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