Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 15584 and 15585 are separated by 549 nucleotides15585 and 15586 are separated by 191 nucleotides15586 and 15587 are separated by 87 nucleotides15587 and 15588 are separated by 95 nucleotides mRNA_7216: 15584 - K01535 PMA1, PMA2 H+-transporting ATPase, at 1,150,429 to 1,154,847 15584 mRNA_7217: 15585 - KOG3309 Ferredoxin, at 1,155,397 to 1,156,419 15585 mRNA_7218: 15586 - K20405 NPRL2 nitrogen permease regulator 2-like protein, at 1,156,611 to 1,158,564 15586 mRNA_7219: 15587 - K15053 CHMP7 charged multivesicular body protein 7, at 1,158,652 to 1,160,281 15587 mRNA_7220: 15588 - HMMPfam-zinc-RING finger domain-PF14634,ProSitePatterns-Zinc finger RING-type signature.-PS00518,ProSiteProfiles-Zinc finger RING-type profile.-PS50089,SUPERFAMILY--SSF57850, at 1,160,377 to 1,161,832 15588
Group Condition mRNA_7216 mRNA_7217 mRNA_7218 mRNA_7219 mRNA_7220
15584 15585 15586 15587 15588
facs on lipid accumulation Sorted High BODIPY Gate -0.1 N.D. -0.9 -1.3 -1.0
facs on lipid accumulation Sorted No BODIPY Gate +0.1 N.D. -1.5 -1.9 +0.3
facs on lipid accumulation Sorted Low BODIPY Gate -0.2 N.D. -0.5 -1.2 -0.9
ypd buoyancy 40 hrs No Buoyancy Separation +0.2 N.D. +0.2 -2.7 -0.4
auxotrophy Dropout Complete +0.1 N.D. -0.7 -2.2 +0.5
growth on ricinoleic acid YNB Ricinoleic Acid +0.1 N.D. -0.4 -1.9 +0.5
growth on oleic acid YNB Glucose +0.0 N.D. -1.1 -0.8 +0.2
ypd buoyancy 40 hrs Low Buoyancy +0.1 N.D. +0.2 -1.2 -0.5
auxotrophy YNB Glucose 75mM Arginine +0.1 N.D. -0.2 -1.1 +0.1
ypd buoyancy 40 hrs Median Buoyancy +0.1 N.D. +0.2 -1.4 +0.1
growth on oleic acid YNB Oleic Acid +0.1 N.D. -0.6 -0.5 +0.0
auxotrophy YNB Glucose +0.2 N.D. -0.1 -0.8 -0.1
growth on ricinoleic acid YNB Glucose +0.2 N.D. -0.2 -1.0 +0.4
auxotrophy YNB Glucose 75mM Methionine +0.1 N.D. -0.9 +0.1 +0.2
growth on ricinoleic acid YNB Methylricinoleic Acid +0.1 N.D. +0.2 -1.1 +0.6
ypd buoyancy 40 hrs High Buoyancy +0.1 N.D. -0.1 -0.4 +0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 N.D. -0.5 +1.9 +0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2 N.D. -0.7 +1.8 +0.6
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2 N.D. -0.9 +2.7 +0.1
growth on ypd YPD -0.1 N.D. +1.7 +0.1 +0.5
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 N.D. -0.1 +2.4 +0.4
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