Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 15586 and 15587 are separated by 87 nucleotides15587 and 15588 are separated by 95 nucleotides15588 and 15589 are separated by 1208 nucleotides15589 and 15590 are separated by 349 nucleotides mRNA_7218: 15586 - K20405 NPRL2 nitrogen permease regulator 2-like protein, at 1,156,611 to 1,158,564 15586 mRNA_7219: 15587 - K15053 CHMP7 charged multivesicular body protein 7, at 1,158,652 to 1,160,281 15587 mRNA_7220: 15588 - HMMPfam-zinc-RING finger domain-PF14634,ProSitePatterns-Zinc finger RING-type signature.-PS00518,ProSiteProfiles-Zinc finger RING-type profile.-PS50089,SUPERFAMILY--SSF57850, at 1,160,377 to 1,161,832 15588 mRNA_7221: 15589 - K02133 ATPeF1B, ATP5B, ATP2 F-type H+-transporting ATPase subunit beta, at 1,163,041 to 1,165,362 15589 mRNA_7222: 15590 - KOG1572 Predicted protein tyrosine phosphatase, at 1,165,712 to 1,166,653 15590
Group Condition mRNA_7218 mRNA_7219 mRNA_7220 mRNA_7221 mRNA_7222
15586 15587 15588 15589 15590
facs on lipid accumulation Sorted High BODIPY Gate -0.9 -1.3 -1.0 N.D. +0.0
facs on lipid accumulation Sorted No BODIPY Gate -1.5 -1.9 +0.3 N.D. +0.1
ypd buoyancy 40 hrs No Buoyancy Separation +0.2 -2.7 -0.4 N.D. +0.1
facs on lipid accumulation Sorted Low BODIPY Gate -0.5 -1.2 -0.9 N.D. +0.5
growth on oleic acid YNB Glucose -1.1 -0.8 +0.2 N.D. -0.4
growth on ricinoleic acid YNB Ricinoleic Acid -0.4 -1.9 +0.5 N.D. -0.2
ypd buoyancy 40 hrs Low Buoyancy +0.2 -1.2 -0.5 N.D. -0.3
auxotrophy Dropout Complete -0.7 -2.2 +0.5 N.D. +0.5
growth on oleic acid YNB Oleic Acid -0.6 -0.5 +0.0 N.D. -0.4
auxotrophy YNB Glucose 75mM Arginine -0.2 -1.1 +0.1 N.D. +0.1
growth on ricinoleic acid YNB Glucose -0.2 -1.0 +0.4 N.D. -0.2
auxotrophy YNB Glucose -0.1 -0.8 -0.1 N.D. +0.1
ypd buoyancy 40 hrs Median Buoyancy +0.2 -1.4 +0.1 N.D. +0.2
growth on ricinoleic acid YNB Methylricinoleic Acid +0.2 -1.1 +0.6 N.D. -0.3
auxotrophy YNB Glucose 75mM Methionine -0.9 +0.1 +0.2 N.D. +0.0
ypd buoyancy 40 hrs High Buoyancy -0.1 -0.4 +0.2 N.D. +0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.5 +1.9 +0.0 N.D. +0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.7 +1.8 +0.6 N.D. -0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.9 +2.7 +0.1 N.D. +0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 +2.4 +0.4 N.D. -0.2
growth on ypd YPD +1.7 +0.1 +0.5 N.D. +0.4
remove
mRNA_7218
plot
remove
mRNA_7219
plot
remove
mRNA_7220
remove
mRNA_7221
plot
remove
mRNA_7222
plot