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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
15590 and 15591 are separated by 273 nucleotides
15591 and 15592 are separated by 136 nucleotides
15592 and 15593 are separated by 736 nucleotides
15593 and 15594 are separated by 582 nucleotides
mRNA_7222: 15590 - KOG1572 Predicted protein tyrosine phosphatase, at 1,165,712 to 1,166,653
15590
mRNA_7223: 15591 - K19983 EXOC1, SEC3 exocyst complex component 1, at 1,166,927 to 1,171,458
15591
mRNA_7224: 15592 - K15564 CTK2 CTD kinase subunit beta, at 1,171,595 to 1,173,622
15592
mRNA_7225: 15593 - Hypothetical Protein, at 1,174,359 to 1,174,926
15593
mRNA_7226: 15594 - HMMPfam-Demethylmenaquinone methyltransferase-PF03737,SUPERFAMILY--SSF89562, at 1,175,509 to 1,176,564
15594
Group
Condition
mRNA
_7222
mRNA
_7223
mRNA
_7224
mRNA
_7225
mRNA
_7226
15590
15591
15592
15593
15594
facs on lipid accumulation
Sorted No BODIPY Gate
+0.1
-2.4
N.D.
+1.2
-0.8
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.0
-0.3
N.D.
+0.1
-0.7
growth on oleic acid
YNB Glucose
-0.4
-0.4
N.D.
+0.2
-0.3
auxotrophy
YNB Glucose 75mM Methionine
+0.0
-0.1
N.D.
-0.0
-0.7
growth on oleic acid
YNB Oleic Acid
-0.4
-0.2
N.D.
-0.0
-0.2
auxotrophy
YNB Glucose 75mM Arginine
+0.1
-0.2
N.D.
-0.4
-0.2
facs on lipid accumulation
Sorted High BODIPY Gate
+0.0
-2.1
N.D.
+0.9
+0.5
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.3
-0.4
N.D.
+0.4
-0.3
auxotrophy
YNB Glucose
+0.1
+0.0
N.D.
+0.0
-0.6
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.0
-1.0
N.D.
+0.6
-0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.2
-0.3
N.D.
+0.4
-0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.1
-1.1
N.D.
+0.7
+0.1
ypd buoyancy
40 hrs No Buoyancy Separation
+0.1
-0.2
N.D.
+0.6
-0.5
ypd buoyancy
40 hrs Low Buoyancy
-0.3
+0.1
N.D.
+0.5
-0.1
growth on ricinoleic acid
YNB Glucose
-0.2
-0.1
N.D.
+0.5
+0.2
auxotrophy
Dropout Complete
+0.5
+0.2
N.D.
+0.1
-0.3
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.5
-1.0
N.D.
+0.8
+0.2
ypd buoyancy
40 hrs Median Buoyancy
+0.2
+0.0
N.D.
+0.2
+0.1
ypd buoyancy
40 hrs High Buoyancy
+0.1
-0.1
N.D.
+0.7
-0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.2
+0.2
N.D.
+0.5
+0.2
growth on ypd
YPD
+0.4
+0.4
N.D.
+0.8
-0.6
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