Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 15593 and 15594 are separated by 582 nucleotides15594 and 15595 are separated by 235 nucleotides15595 and 15596 are separated by 609 nucleotides15596 and 15597 are separated by 434 nucleotides mRNA_7225: 15593 - Hypothetical Protein, at 1,174,359 to 1,174,926 15593 mRNA_7226: 15594 - HMMPfam-Demethylmenaquinone methyltransferase-PF03737,SUPERFAMILY--SSF89562, at 1,175,509 to 1,176,564 15594 mRNA_7227: 15595 - K03239 EIF2B1 translation initiation factor eIF-2B subunit alpha, at 1,176,800 to 1,178,543 15595 mRNA_7228: 15596 - KOG1674 Cyclin, at 1,179,153 to 1,180,280 15596 mRNA_7229: 15597 - Hypothetical Protein, at 1,180,715 to 1,181,387 15597
Group Condition mRNA_7225 mRNA_7226 mRNA_7227 mRNA_7228 mRNA_7229
15593 15594 15595 15596 15597
ypd buoyancy 40 hrs No Buoyancy Separation +0.6 -0.5 -0.9 -0.5 -2.2
growth on oleic acid YNB Oleic Acid -0.0 -0.2 -0.7 -0.1 -0.6
auxotrophy YNB Glucose 75mM Methionine -0.0 -0.7 +0.2 +0.5 -1.4
ypd buoyancy 40 hrs High Buoyancy +0.7 -0.2 +0.1 -0.2 -1.1
growth on oleic acid YNB Glucose +0.2 -0.3 +0.1 -0.1 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid +0.4 -0.3 -1.3 +0.0 +1.0
growth on ricinoleic acid YNB Ricinoleic Acid +0.5 +0.2 -0.6 +0.0 -0.3
auxotrophy YNB Glucose 75mM Arginine -0.4 -0.2 +0.3 +0.0 +0.6
ypd buoyancy 40 hrs Median Buoyancy +0.2 +0.1 +0.2 +0.1 -0.0
facs on lipid accumulation Sorted Low BODIPY Gate +0.8 +0.2 -0.2 -0.2 +0.4
growth on ypd YPD +0.8 -0.6 +0.0 +0.4 +0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 -0.7 -0.5 +0.3 +1.9
facs on lipid accumulation Sorted No BODIPY Gate +1.2 -0.8 +0.2 -0.2 +0.8
ypd buoyancy 40 hrs Low Buoyancy +0.5 -0.1 +0.3 -0.1 +0.8
auxotrophy Dropout Complete +0.1 -0.3 +0.3 +0.6 +1.0
growth on ricinoleic acid YNB Glucose +0.5 +0.2 +0.7 +0.1 +0.5
auxotrophy YNB Glucose +0.0 -0.6 +0.6 +0.5 +1.5
facs on lipid accumulation Sorted High BODIPY Gate +0.9 +0.5 +0.3 -0.2 +0.8
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.7 +0.1 -0.9 +0.8 +2.2
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.6 -0.1 -0.9 +0.7 +2.7
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.4 -0.1 +0.0 +0.7 +3.6
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