Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
15594 and 15595 are separated by 235 nucleotides
15595 and 15596 are separated by 609 nucleotides
15596 and 15597 are separated by 434 nucleotides
15597 and 15598 are separated by 240 nucleotides
mRNA_7226: 15594 - HMMPfam-Demethylmenaquinone methyltransferase-PF03737,SUPERFAMILY--SSF89562, at 1,175,509 to 1,176,564
15594
mRNA_7227: 15595 - K03239 EIF2B1 translation initiation factor eIF-2B subunit alpha, at 1,176,800 to 1,178,543
15595
mRNA_7228: 15596 - KOG1674 Cyclin, at 1,179,153 to 1,180,280
15596
mRNA_7229: 15597 - Hypothetical Protein, at 1,180,715 to 1,181,387
15597
mRNA_7230: 15598 - K07019 K07019 uncharacterized protein, at 1,181,628 to 1,183,243
15598
Group
Condition
mRNA
_7226
mRNA
_7227
mRNA
_7228
mRNA
_7229
mRNA
_7230
15594
15595
15596
15597
15598
ypd buoyancy
40 hrs No Buoyancy Separation
-0.5
-0.9
-0.5
-2.2
+0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.2
-0.6
+0.0
-0.3
-3.0
ypd buoyancy
40 hrs High Buoyancy
-0.2
+0.1
-0.2
-1.1
-0.2
growth on oleic acid
YNB Oleic Acid
-0.2
-0.7
-0.1
-0.6
+0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.3
-1.3
+0.0
+1.0
-0.7
auxotrophy
YNB Glucose 75mM Methionine
-0.7
+0.2
+0.5
-1.4
+0.3
growth on oleic acid
YNB Glucose
-0.3
+0.1
-0.1
-0.1
+0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.2
-0.2
-0.2
+0.4
-0.2
growth on ypd
YPD
-0.6
+0.0
+0.4
+0.3
-0.0
facs on lipid accumulation
Sorted No BODIPY Gate
-0.8
+0.2
-0.2
+0.8
+0.3
ypd buoyancy
40 hrs Median Buoyancy
+0.1
+0.2
+0.1
-0.0
-0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.7
-0.5
+0.3
+1.9
-0.3
ypd buoyancy
40 hrs Low Buoyancy
-0.1
+0.3
-0.1
+0.8
-0.1
growth on ricinoleic acid
YNB Glucose
+0.2
+0.7
+0.1
+0.5
-0.5
auxotrophy
YNB Glucose 75mM Arginine
-0.2
+0.3
+0.0
+0.6
+0.3
facs on lipid accumulation
Sorted High BODIPY Gate
+0.5
+0.3
-0.2
+0.8
+0.1
auxotrophy
Dropout Complete
-0.3
+0.3
+0.6
+1.0
+0.3
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.1
-0.9
+0.8
+2.2
-0.0
auxotrophy
YNB Glucose
-0.6
+0.6
+0.5
+1.5
+0.5
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.1
-0.9
+0.7
+2.7
+0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.1
+0.0
+0.7
+3.6
-0.5
remove
mRNA_7226
plot
remove
mRNA_7227
plot
remove
mRNA_7228
remove
mRNA_7229
plot
remove
mRNA_7230
plot