Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 15594 and 15595 are separated by 235 nucleotides15595 and 15596 are separated by 609 nucleotides15596 and 15597 are separated by 434 nucleotides15597 and 15598 are separated by 240 nucleotides mRNA_7226: 15594 - HMMPfam-Demethylmenaquinone methyltransferase-PF03737,SUPERFAMILY--SSF89562, at 1,175,509 to 1,176,564 15594 mRNA_7227: 15595 - K03239 EIF2B1 translation initiation factor eIF-2B subunit alpha, at 1,176,800 to 1,178,543 15595 mRNA_7228: 15596 - KOG1674 Cyclin, at 1,179,153 to 1,180,280 15596 mRNA_7229: 15597 - Hypothetical Protein, at 1,180,715 to 1,181,387 15597 mRNA_7230: 15598 - K07019 K07019 uncharacterized protein, at 1,181,628 to 1,183,243 15598
Group Condition mRNA_7226 mRNA_7227 mRNA_7228 mRNA_7229 mRNA_7230
15594 15595 15596 15597 15598
ypd buoyancy 40 hrs No Buoyancy Separation -0.5 -0.9 -0.5 -2.2 +0.2
growth on ricinoleic acid YNB Ricinoleic Acid +0.2 -0.6 +0.0 -0.3 -3.0
ypd buoyancy 40 hrs High Buoyancy -0.2 +0.1 -0.2 -1.1 -0.2
growth on oleic acid YNB Oleic Acid -0.2 -0.7 -0.1 -0.6 +0.2
growth on ricinoleic acid YNB Methylricinoleic Acid -0.3 -1.3 +0.0 +1.0 -0.7
auxotrophy YNB Glucose 75mM Methionine -0.7 +0.2 +0.5 -1.4 +0.3
growth on oleic acid YNB Glucose -0.3 +0.1 -0.1 -0.1 +0.2
facs on lipid accumulation Sorted Low BODIPY Gate +0.2 -0.2 -0.2 +0.4 -0.2
growth on ypd YPD -0.6 +0.0 +0.4 +0.3 -0.0
facs on lipid accumulation Sorted No BODIPY Gate -0.8 +0.2 -0.2 +0.8 +0.3
ypd buoyancy 40 hrs Median Buoyancy +0.1 +0.2 +0.1 -0.0 -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.7 -0.5 +0.3 +1.9 -0.3
ypd buoyancy 40 hrs Low Buoyancy -0.1 +0.3 -0.1 +0.8 -0.1
growth on ricinoleic acid YNB Glucose +0.2 +0.7 +0.1 +0.5 -0.5
auxotrophy YNB Glucose 75mM Arginine -0.2 +0.3 +0.0 +0.6 +0.3
facs on lipid accumulation Sorted High BODIPY Gate +0.5 +0.3 -0.2 +0.8 +0.1
auxotrophy Dropout Complete -0.3 +0.3 +0.6 +1.0 +0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.1 -0.9 +0.8 +2.2 -0.0
auxotrophy YNB Glucose -0.6 +0.6 +0.5 +1.5 +0.5
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 -0.9 +0.7 +2.7 +0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 +0.0 +0.7 +3.6 -0.5
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