Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 15596 and 15597 are separated by 434 nucleotides15597 and 15598 are separated by 240 nucleotides15598 and 15599 are separated by 186 nucleotides15599 and 15600 are separated by 947 nucleotides mRNA_7228: 15596 - KOG1674 Cyclin, at 1,179,153 to 1,180,280 15596 mRNA_7229: 15597 - Hypothetical Protein, at 1,180,715 to 1,181,387 15597 mRNA_7230: 15598 - K07019 K07019 uncharacterized protein, at 1,181,628 to 1,183,243 15598 mRNA_7231: 15599 - Hypothetical Protein, at 1,183,430 to 1,185,124 15599 mRNA_7232: 15600 - K10572 IPPK inositol-pentakisphosphate 2-kinase, at 1,186,072 to 1,187,585 15600
Group Condition mRNA_7228 mRNA_7229 mRNA_7230 mRNA_7231 mRNA_7232
15596 15597 15598 15599 15600
growth on ricinoleic acid YNB Ricinoleic Acid +0.0 -0.3 -3.0 -0.1 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation -0.5 -2.2 +0.2 +0.0 N.D.
ypd buoyancy 40 hrs High Buoyancy -0.2 -1.1 -0.2 +0.2 N.D.
growth on oleic acid YNB Oleic Acid -0.1 -0.6 +0.2 +0.0 N.D.
auxotrophy YNB Glucose 75mM Methionine +0.5 -1.4 +0.3 +0.2 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate -0.2 +0.4 -0.2 -0.2 N.D.
ypd buoyancy 40 hrs Median Buoyancy +0.1 -0.0 -0.2 -0.1 N.D.
growth on oleic acid YNB Glucose -0.1 -0.1 +0.2 +0.2 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid +0.0 +1.0 -0.7 -0.2 N.D.
growth on ricinoleic acid YNB Glucose +0.1 +0.5 -0.5 +0.0 N.D.
ypd buoyancy 40 hrs Low Buoyancy -0.1 +0.8 -0.1 +0.1 N.D.
growth on ypd YPD +0.4 +0.3 -0.0 +0.3 N.D.
facs on lipid accumulation Sorted High BODIPY Gate -0.2 +0.8 +0.1 +0.3 N.D.
facs on lipid accumulation Sorted No BODIPY Gate -0.2 +0.8 +0.3 +0.4 N.D.
auxotrophy YNB Glucose 75mM Arginine +0.0 +0.6 +0.3 +0.3 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.3 +1.9 -0.3 -0.1 N.D.
auxotrophy Dropout Complete +0.6 +1.0 +0.3 +0.3 N.D.
auxotrophy YNB Glucose +0.5 +1.5 +0.5 +0.3 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.8 +2.2 -0.0 -0.1 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.7 +2.7 +0.2 -0.6 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.7 +3.6 -0.5 -0.2 N.D.
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