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Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
15600 and 15601 are separated by 107 nucleotides
15601 and 15602 are separated by 171 nucleotides
15602 and 15603 are separated by 638 nucleotides
15603 and 15604 are separated by 596 nucleotides
mRNA_7232: 15600 - K10572 IPPK inositol-pentakisphosphate 2-kinase, at 1,186,072 to 1,187,585
15600
mRNA_7233: 15601 - Hypothetical Protein, at 1,187,693 to 1,188,676
15601
mRNA_7234: 15602 - HMMPfam-Mitochondrial ribosomal protein subunit-PF11709, at 1,188,848 to 1,190,629
15602
mRNA_7235: 15603 - Hypothetical Protein, at 1,191,268 to 1,192,067
15603
mRNA_7236: 15604 - Hypothetical Protein, at 1,192,664 to 1,193,230
15604
Group
Condition
mRNA
_7232
mRNA
_7233
mRNA
_7234
mRNA
_7235
mRNA
_7236
15600
15601
15602
15603
15604
ypd buoyancy
40 hrs No Buoyancy Separation
N.D.
+0.2
N.D.
-0.2
-2.5
facs on lipid accumulation
Sorted No BODIPY Gate
N.D.
-0.5
N.D.
+0.1
-0.4
ypd buoyancy
40 hrs Low Buoyancy
N.D.
-0.6
N.D.
+0.3
-0.4
auxotrophy
Dropout Complete
N.D.
-0.8
N.D.
+0.2
-0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
N.D.
-0.1
N.D.
-0.3
-0.3
ypd buoyancy
40 hrs High Buoyancy
N.D.
-0.3
N.D.
+0.4
-0.6
auxotrophy
YNB Glucose
N.D.
-0.3
N.D.
+0.3
-0.2
growth on oleic acid
YNB Glucose
N.D.
-0.3
N.D.
+0.2
+0.0
ypd buoyancy
40 hrs Median Buoyancy
N.D.
-0.1
N.D.
-0.0
+0.0
growth on ricinoleic acid
YNB Glucose
N.D.
-0.9
N.D.
+0.4
+0.5
buoyancy on lipid accumulation
40 hrs High Buoyancy
N.D.
-0.2
N.D.
-0.3
+0.6
facs on lipid accumulation
Sorted High BODIPY Gate
N.D.
-0.2
N.D.
+0.2
+0.1
auxotrophy
YNB Glucose 75mM Methionine
N.D.
-0.1
N.D.
+0.2
+0.2
growth on ypd
YPD
N.D.
+0.9
N.D.
+0.1
-0.5
auxotrophy
YNB Glucose 75mM Arginine
N.D.
+0.1
N.D.
+0.4
+0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
N.D.
+0.2
N.D.
-0.1
+0.6
buoyancy on lipid accumulation
40 hrs Median Buoyancy
N.D.
+0.1
N.D.
-0.1
+0.9
growth on ricinoleic acid
YNB Methylricinoleic Acid
N.D.
-0.0
N.D.
+0.8
+0.1
growth on oleic acid
YNB Oleic Acid
N.D.
-0.8
N.D.
+0.7
+1.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
N.D.
+0.5
N.D.
-0.2
+1.5
growth on ricinoleic acid
YNB Ricinoleic Acid
N.D.
+0.4
N.D.
+0.9
+0.7
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