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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
15602 and 15603 are separated by 638 nucleotides
15603 and 15604 are separated by 596 nucleotides
15604 and 15605 are separated by 282 nucleotides
15605 and 15606 are separated by 482 nucleotides
mRNA_7234: 15602 - HMMPfam-Mitochondrial ribosomal protein subunit-PF11709, at 1,188,848 to 1,190,629
15602
mRNA_7235: 15603 - Hypothetical Protein, at 1,191,268 to 1,192,067
15603
mRNA_7236: 15604 - Hypothetical Protein, at 1,192,664 to 1,193,230
15604
mRNA_7237: 15605 - Hypothetical Protein, at 1,193,513 to 1,195,819
15605
mRNA_7238: 15606 - Hypothetical Protein, at 1,196,302 to 1,197,931
15606
Group
Condition
mRNA
_7234
mRNA
_7235
mRNA
_7236
mRNA
_7237
mRNA
_7238
15602
15603
15604
15605
15606
ypd buoyancy
40 hrs No Buoyancy Separation
N.D.
-0.2
-2.5
-0.6
+0.1
ypd buoyancy
40 hrs High Buoyancy
N.D.
+0.4
-0.6
-0.5
-0.4
buoyancy on lipid accumulation
40 hrs High Buoyancy
N.D.
-0.3
+0.6
-0.7
-0.2
facs on lipid accumulation
Sorted No BODIPY Gate
N.D.
+0.1
-0.4
+0.2
-0.2
auxotrophy
Dropout Complete
N.D.
+0.2
-0.1
-0.4
+0.1
ypd buoyancy
40 hrs Low Buoyancy
N.D.
+0.3
-0.4
-0.2
+0.1
auxotrophy
YNB Glucose
N.D.
+0.3
-0.2
-0.2
-0.1
facs on lipid accumulation
Sorted High BODIPY Gate
N.D.
+0.2
+0.1
-0.1
-0.4
facs on lipid accumulation
Sorted Low BODIPY Gate
N.D.
-0.3
-0.3
+0.3
+0.1
ypd buoyancy
40 hrs Median Buoyancy
N.D.
-0.0
+0.0
-0.3
+0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
N.D.
-0.1
+0.6
-0.0
-0.4
auxotrophy
YNB Glucose 75mM Methionine
N.D.
+0.2
+0.2
-0.4
+0.1
growth on ypd
YPD
N.D.
+0.1
-0.5
+0.1
+0.5
growth on oleic acid
YNB Glucose
N.D.
+0.2
+0.0
-0.0
+0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
N.D.
-0.1
+0.9
-0.2
-0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
N.D.
-0.2
+1.5
-0.5
-0.2
auxotrophy
YNB Glucose 75mM Arginine
N.D.
+0.4
+0.2
+0.0
+0.1
growth on ricinoleic acid
YNB Glucose
N.D.
+0.4
+0.5
-0.1
-0.0
growth on ricinoleic acid
YNB Methylricinoleic Acid
N.D.
+0.8
+0.1
+0.1
+0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
N.D.
+0.9
+0.7
+0.2
-0.2
growth on oleic acid
YNB Oleic Acid
N.D.
+0.7
+1.2
+0.1
+0.0
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