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Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
15605 and 15606 are separated by 482 nucleotides
15606 and 15607 are separated by 560 nucleotides
15607 and 15608 are separated by 354 nucleotides
15608 and 15609 are separated by 155 nucleotides
mRNA_7237: 15605 - Hypothetical Protein, at 1,193,513 to 1,195,819
15605
mRNA_7238: 15606 - Hypothetical Protein, at 1,196,302 to 1,197,931
15606
mRNA_7239: 15607 - Hypothetical Protein, at 1,198,492 to 1,200,248
15607
mRNA_7240: 15608 - Hypothetical Protein, at 1,200,603 to 1,202,744
15608
mRNA_7241: 15609 - K01265 map methionyl aminopeptidase, at 1,202,900 to 1,205,057
15609
Group
Condition
mRNA
_7237
mRNA
_7238
mRNA
_7239
mRNA
_7240
mRNA
_7241
15605
15606
15607
15608
15609
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.2
-0.2
-0.3
-0.3
-0.6
ypd buoyancy
40 hrs High Buoyancy
-0.5
-0.4
+0.4
-0.0
-0.7
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.7
-0.2
-0.0
+0.2
-0.4
growth on ricinoleic acid
YNB Glucose
-0.1
-0.0
-0.1
-0.4
-0.5
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.5
-0.2
+0.3
-0.0
-0.6
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.1
+0.1
+0.2
-0.2
-1.1
auxotrophy
YNB Glucose 75mM Methionine
-0.4
+0.1
+0.1
-0.1
-0.6
auxotrophy
Dropout Complete
-0.4
+0.1
+0.3
-0.0
-0.5
growth on oleic acid
YNB Oleic Acid
+0.1
+0.0
-0.4
+0.2
-0.5
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.2
-0.2
+0.2
+0.2
-0.5
auxotrophy
YNB Glucose
-0.2
-0.1
+0.3
+0.2
-0.6
auxotrophy
YNB Glucose 75mM Arginine
+0.0
+0.1
-0.1
+0.0
-0.4
ypd buoyancy
40 hrs No Buoyancy Separation
-0.6
+0.1
+0.4
+0.2
-0.4
ypd buoyancy
40 hrs Median Buoyancy
-0.3
+0.2
+0.3
-0.2
-0.1
growth on oleic acid
YNB Glucose
-0.0
+0.2
+0.0
-0.0
-0.3
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.0
-0.4
+0.2
+0.1
+0.0
facs on lipid accumulation
Sorted High BODIPY Gate
-0.1
-0.4
+0.1
+0.5
-0.1
ypd buoyancy
40 hrs Low Buoyancy
-0.2
+0.1
+0.3
+0.1
-0.3
facs on lipid accumulation
Sorted No BODIPY Gate
+0.2
-0.2
+0.4
-0.2
-0.1
growth on ypd
YPD
+0.1
+0.5
+0.1
+0.1
-0.5
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.3
+0.1
+0.8
+0.6
-0.3
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