Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 15608 and 15609 are separated by 155 nucleotides15609 and 15610 are separated by 214 nucleotides15610 and 15611 are separated by 1063 nucleotides15611 and 15612 are separated by 353 nucleotides mRNA_7240: 15608 - Hypothetical Protein, at 1,200,603 to 1,202,744 15608 mRNA_7241: 15609 - K01265 map methionyl aminopeptidase, at 1,202,900 to 1,205,057 15609 mRNA_7242: 15610 - K01265 map methionyl aminopeptidase, at 1,205,272 to 1,206,934 15610 mRNA_7243: 15611 - Hypothetical Protein, at 1,207,998 to 1,209,411 15611 mRNA_7244: 15612 - HMMPfam-PQ loop repeat-PF04193,SMART-Repeated motif present between transmembrane helices in cystinosin, yeast ERS1p, mannose-P-dolichol utilization defect 1, and other hypothetical proteins.-SM00679, at 1,209,765 to 1,211,262 15612
Group Condition mRNA_7240 mRNA_7241 mRNA_7242 mRNA_7243 mRNA_7244
15608 15609 15610 15611 15612
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2 -1.1 +0.0 -0.4 +0.2
ypd buoyancy 40 hrs No Buoyancy Separation +0.2 -0.4 -0.4 -0.6 -0.1
growth on ricinoleic acid YNB Glucose -0.4 -0.5 -0.2 -0.3 +0.2
growth on ricinoleic acid YNB Ricinoleic Acid -0.3 -0.6 -0.1 -0.1 +0.2
growth on oleic acid YNB Glucose -0.0 -0.3 -0.5 +0.0 +0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.2 -0.4 -0.0 -0.3 -0.0
auxotrophy YNB Glucose 75mM Methionine -0.1 -0.6 -0.0 -0.2 +0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.0 -0.6 +0.1 -0.3 +0.3
ypd buoyancy 40 hrs High Buoyancy -0.0 -0.7 -0.0 +0.3 +0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.2 -0.5 -0.0 -0.0 -0.0
growth on ypd YPD +0.1 -0.5 -0.1 -0.2 +0.3
facs on lipid accumulation Sorted High BODIPY Gate +0.5 -0.1 -0.5 -0.1 -0.1
auxotrophy Dropout Complete -0.0 -0.5 +0.1 -0.3 +0.4
facs on lipid accumulation Sorted No BODIPY Gate -0.2 -0.1 -0.5 +0.3 +0.3
growth on oleic acid YNB Oleic Acid +0.2 -0.5 -0.2 +0.2 +0.1
ypd buoyancy 40 hrs Median Buoyancy -0.2 -0.1 -0.1 +0.2 +0.1
facs on lipid accumulation Sorted Low BODIPY Gate +0.6 -0.3 -0.3 -0.2 +0.1
ypd buoyancy 40 hrs Low Buoyancy +0.1 -0.3 -0.1 +0.0 +0.3
auxotrophy YNB Glucose 75mM Arginine +0.0 -0.4 +0.3 -0.1 +0.4
auxotrophy YNB Glucose +0.2 -0.6 +0.2 +0.1 +0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.1 +0.0 -0.1 +0.0 +0.4
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