Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt 15609 and 15610 are separated by 214 nucleotides15610 and 15611 are separated by 1063 nucleotides15611 and 15612 are separated by 353 nucleotides15612 and 15613 are separated by 432 nucleotides mRNA_7241: 15609 - K01265 map methionyl aminopeptidase, at 1,202,900 to 1,205,057 15609 mRNA_7242: 15610 - K01265 map methionyl aminopeptidase, at 1,205,272 to 1,206,934 15610 mRNA_7243: 15611 - Hypothetical Protein, at 1,207,998 to 1,209,411 15611 mRNA_7244: 15612 - HMMPfam-PQ loop repeat-PF04193,SMART-Repeated motif present between transmembrane helices in cystinosin, yeast ERS1p, mannose-P-dolichol utilization defect 1, and other hypothetical proteins.-SM00679, at 1,209,765 to 1,211,262 15612 mRNA_7245: 15613 - K17972 NAA20, NAT3 N-terminal acetyltransferase B complex catalytic subunit, at 1,211,695 to 1,212,788 15613
Group Condition mRNA_7241 mRNA_7242 mRNA_7243 mRNA_7244 mRNA_7245
15609 15610 15611 15612 15613
ypd buoyancy 40 hrs No Buoyancy Separation -0.4 -0.4 -0.6 -0.1 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid -1.1 +0.0 -0.4 +0.2 N.D.
growth on ricinoleic acid YNB Glucose -0.5 -0.2 -0.3 +0.2 N.D.
facs on lipid accumulation Sorted High BODIPY Gate -0.1 -0.5 -0.1 -0.1 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.4 -0.0 -0.3 -0.0 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate -0.3 -0.3 -0.2 +0.1 N.D.
growth on oleic acid YNB Glucose -0.3 -0.5 +0.0 +0.1 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid -0.6 -0.1 -0.1 +0.2 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.5 -0.0 -0.0 -0.0 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.6 +0.1 -0.3 +0.3 N.D.
growth on ypd YPD -0.5 -0.1 -0.2 +0.3 N.D.
auxotrophy YNB Glucose 75mM Methionine -0.6 -0.0 -0.2 +0.4 N.D.
growth on oleic acid YNB Oleic Acid -0.5 -0.2 +0.2 +0.1 N.D.
ypd buoyancy 40 hrs High Buoyancy -0.7 -0.0 +0.3 +0.1 N.D.
auxotrophy Dropout Complete -0.5 +0.1 -0.3 +0.4 N.D.
ypd buoyancy 40 hrs Low Buoyancy -0.3 -0.1 +0.0 +0.3 N.D.
facs on lipid accumulation Sorted No BODIPY Gate -0.1 -0.5 +0.3 +0.3 N.D.
ypd buoyancy 40 hrs Median Buoyancy -0.1 -0.1 +0.2 +0.1 N.D.
auxotrophy YNB Glucose -0.6 +0.2 +0.1 +0.4 N.D.
auxotrophy YNB Glucose 75mM Arginine -0.4 +0.3 -0.1 +0.4 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.0 -0.1 +0.0 +0.4 N.D.
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