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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
15613 and 15614 are separated by 72 nucleotides
15614 and 15615 are separated by 146 nucleotides
15615 and 15616 are separated by 192 nucleotides
15616 and 15617 are separated by 349 nucleotides
mRNA_7245: 15613 - K17972 NAA20, NAT3 N-terminal acetyltransferase B complex catalytic subunit, at 1,211,695 to 1,212,788
15613
mRNA_7246: 15614 - Hypothetical Protein, at 1,212,861 to 1,214,455
15614
mRNA_7247: 15615 - Hypothetical Protein, at 1,214,602 to 1,216,220
15615
mRNA_7248: 15616 - HMMPfam-N-acetyltransferase-PF00797,SUPERFAMILY--SSF54001, at 1,216,413 to 1,217,523
15616
mRNA_7249: 15617 - Hypothetical Protein, at 1,217,873 to 1,218,626
15617
Group
Condition
mRNA
_7245
mRNA
_7246
mRNA
_7247
mRNA
_7248
mRNA
_7249
15613
15614
15615
15616
15617
ypd buoyancy
40 hrs No Buoyancy Separation
N.D.
-0.1
-0.5
-0.4
-0.4
buoyancy on lipid accumulation
40 hrs Median Buoyancy
N.D.
-0.2
+0.1
-0.1
-0.7
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
N.D.
-0.3
-0.1
-0.2
-0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
N.D.
-0.1
+0.1
-0.3
-0.2
ypd buoyancy
40 hrs Low Buoyancy
N.D.
+0.3
-0.0
+0.1
-0.7
ypd buoyancy
40 hrs Median Buoyancy
N.D.
+0.1
-0.1
+0.1
-0.4
growth on ricinoleic acid
YNB Glucose
N.D.
+0.2
-0.3
-0.0
-0.0
auxotrophy
Dropout Complete
N.D.
+0.3
-0.2
-0.3
+0.1
ypd buoyancy
40 hrs High Buoyancy
N.D.
+0.1
+0.2
+0.0
-0.5
buoyancy on lipid accumulation
40 hrs High Buoyancy
N.D.
+0.0
+0.1
+0.0
-0.2
auxotrophy
YNB Glucose 75mM Arginine
N.D.
+0.0
-0.1
-0.1
+0.3
growth on ricinoleic acid
YNB Methylricinoleic Acid
N.D.
+0.1
+0.2
-0.0
+0.0
auxotrophy
YNB Glucose 75mM Methionine
N.D.
+0.3
-0.0
-0.2
+0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
N.D.
+0.1
+0.3
-0.2
+0.0
auxotrophy
YNB Glucose
N.D.
+0.4
-0.1
-0.1
+0.1
facs on lipid accumulation
Sorted High BODIPY Gate
N.D.
+0.5
+0.3
-0.1
-0.3
growth on oleic acid
YNB Oleic Acid
N.D.
+0.1
-0.2
+0.1
+0.5
facs on lipid accumulation
Sorted Low BODIPY Gate
N.D.
+0.5
+0.1
+0.1
-0.0
facs on lipid accumulation
Sorted No BODIPY Gate
N.D.
+0.2
+0.3
+0.1
+0.0
growth on oleic acid
YNB Glucose
N.D.
+0.0
+0.1
+0.2
+0.4
growth on ypd
YPD
N.D.
+0.2
+0.2
+0.1
+0.6
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