Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
15615 and 15616 are separated by 192 nucleotides
15616 and 15617 are separated by 349 nucleotides
15617 and 15618 are separated by 343 nucleotides
15618 and 15619 are separated by 322 nucleotides
mRNA_7247: 15615 - Hypothetical Protein, at 1,214,602 to 1,216,220
15615
mRNA_7248: 15616 - HMMPfam-N-acetyltransferase-PF00797,SUPERFAMILY--SSF54001, at 1,216,413 to 1,217,523
15616
mRNA_7249: 15617 - Hypothetical Protein, at 1,217,873 to 1,218,626
15617
mRNA_7250: 15618 - BLAST ClpP/crotonase [Saitoella complicata NRRL Y-17804], at 1,218,970 to 1,220,341
15618
mRNA_7251: 15619 - Hypothetical Protein, at 1,220,664 to 1,222,024
15619
Group
Condition
mRNA
_7247
mRNA
_7248
mRNA
_7249
mRNA
_7250
mRNA
_7251
15615
15616
15617
15618
15619
ypd buoyancy
40 hrs High Buoyancy
+0.2
+0.0
-0.5
-0.2
-0.4
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.1
-0.1
-0.7
-0.1
-0.1
ypd buoyancy
40 hrs No Buoyancy Separation
-0.5
-0.4
-0.4
+0.2
+0.2
auxotrophy
Dropout Complete
-0.2
-0.3
+0.1
-0.1
-0.2
ypd buoyancy
40 hrs Median Buoyancy
-0.1
+0.1
-0.4
-0.1
-0.2
ypd buoyancy
40 hrs Low Buoyancy
-0.0
+0.1
-0.7
-0.0
-0.0
growth on ricinoleic acid
YNB Glucose
-0.3
-0.0
-0.0
-0.1
-0.0
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.1
-0.2
-0.1
-0.2
+0.1
auxotrophy
YNB Glucose 75mM Arginine
-0.1
-0.1
+0.3
-0.2
-0.4
auxotrophy
YNB Glucose
-0.1
-0.1
+0.1
-0.0
-0.2
auxotrophy
YNB Glucose 75mM Methionine
-0.0
-0.2
+0.1
-0.1
-0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.1
-0.3
-0.2
-0.1
+0.3
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.1
+0.0
-0.2
+0.0
-0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.2
-0.0
+0.0
-0.1
-0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.3
-0.2
+0.0
-0.1
-0.1
facs on lipid accumulation
Sorted High BODIPY Gate
+0.3
-0.1
-0.3
+0.1
+0.1
growth on oleic acid
YNB Oleic Acid
-0.2
+0.1
+0.5
-0.1
-0.0
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.1
+0.1
-0.0
-0.1
+0.2
growth on oleic acid
YNB Glucose
+0.1
+0.2
+0.4
-0.3
-0.0
facs on lipid accumulation
Sorted No BODIPY Gate
+0.3
+0.1
+0.0
+0.2
+0.1
growth on ypd
YPD
+0.2
+0.1
+0.6
+0.3
+0.8
remove
mRNA_7247
plot
remove
mRNA_7248
plot
remove
mRNA_7249
remove
mRNA_7250
plot
remove
mRNA_7251
plot