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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
15616 and 15617 are separated by 349 nucleotides
15617 and 15618 are separated by 343 nucleotides
15618 and 15619 are separated by 322 nucleotides
15619 and 15620 are separated by 256 nucleotides
mRNA_7248: 15616 - HMMPfam-N-acetyltransferase-PF00797,SUPERFAMILY--SSF54001, at 1,216,413 to 1,217,523
15616
mRNA_7249: 15617 - Hypothetical Protein, at 1,217,873 to 1,218,626
15617
mRNA_7250: 15618 - BLAST ClpP/crotonase [Saitoella complicata NRRL Y-17804], at 1,218,970 to 1,220,341
15618
mRNA_7251: 15619 - Hypothetical Protein, at 1,220,664 to 1,222,024
15619
mRNA_7252: 15620 - Hypothetical Protein, at 1,222,281 to 1,223,804
15620
Group
Condition
mRNA
_7248
mRNA
_7249
mRNA
_7250
mRNA
_7251
mRNA
_7252
15616
15617
15618
15619
15620
ypd buoyancy
40 hrs High Buoyancy
+0.0
-0.5
-0.2
-0.4
-0.5
ypd buoyancy
40 hrs Low Buoyancy
+0.1
-0.7
-0.0
-0.0
-0.3
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.1
-0.7
-0.1
-0.1
+0.4
ypd buoyancy
40 hrs Median Buoyancy
+0.1
-0.4
-0.1
-0.2
-0.1
ypd buoyancy
40 hrs No Buoyancy Separation
-0.4
-0.4
+0.2
+0.2
-0.2
facs on lipid accumulation
Sorted High BODIPY Gate
-0.1
-0.3
+0.1
+0.1
-0.0
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.3
-0.2
-0.1
+0.3
+0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.2
-0.1
-0.2
+0.1
+0.3
auxotrophy
YNB Glucose 75mM Methionine
-0.2
+0.1
-0.1
-0.2
+0.3
auxotrophy
YNB Glucose
-0.1
+0.1
-0.0
-0.2
+0.3
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.0
+0.0
-0.1
-0.1
+0.3
growth on ricinoleic acid
YNB Glucose
-0.0
-0.0
-0.1
-0.0
+0.3
auxotrophy
Dropout Complete
-0.3
+0.1
-0.1
-0.2
+0.7
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.1
-0.0
-0.1
+0.2
+0.0
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.2
+0.0
-0.1
-0.1
+0.5
auxotrophy
YNB Glucose 75mM Arginine
-0.1
+0.3
-0.2
-0.4
+0.6
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.0
-0.2
+0.0
-0.1
+0.6
growth on oleic acid
YNB Glucose
+0.2
+0.4
-0.3
-0.0
+0.3
facs on lipid accumulation
Sorted No BODIPY Gate
+0.1
+0.0
+0.2
+0.1
+0.5
growth on oleic acid
YNB Oleic Acid
+0.1
+0.5
-0.1
-0.0
+0.4
growth on ypd
YPD
+0.1
+0.6
+0.3
+0.8
-0.3
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