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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
15617 and 15618 are separated by 343 nucleotides
15618 and 15619 are separated by 322 nucleotides
15619 and 15620 are separated by 256 nucleotides
15620 and 15621 are separated by 743 nucleotides
mRNA_7249: 15617 - Hypothetical Protein, at 1,217,873 to 1,218,626
15617
mRNA_7250: 15618 - BLAST ClpP/crotonase [Saitoella complicata NRRL Y-17804], at 1,218,970 to 1,220,341
15618
mRNA_7251: 15619 - Hypothetical Protein, at 1,220,664 to 1,222,024
15619
mRNA_7252: 15620 - Hypothetical Protein, at 1,222,281 to 1,223,804
15620
mRNA_7253: 15621 - KOG2497 Predicted methyltransferase, at 1,224,548 to 1,225,738
15621
Group
Condition
mRNA
_7249
mRNA
_7250
mRNA
_7251
mRNA
_7252
mRNA
_7253
15617
15618
15619
15620
15621
ypd buoyancy
40 hrs High Buoyancy
-0.5
-0.2
-0.4
-0.5
-0.6
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.0
-0.1
+0.2
+0.0
-1.5
ypd buoyancy
40 hrs Median Buoyancy
-0.4
-0.1
-0.2
-0.1
-0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.7
-0.1
-0.1
+0.4
-0.0
ypd buoyancy
40 hrs Low Buoyancy
-0.7
-0.0
-0.0
-0.3
+0.3
ypd buoyancy
40 hrs No Buoyancy Separation
-0.4
+0.2
+0.2
-0.2
-0.3
facs on lipid accumulation
Sorted High BODIPY Gate
-0.3
+0.1
+0.1
-0.0
-0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.0
-0.1
-0.1
+0.3
-0.2
auxotrophy
Dropout Complete
+0.1
-0.1
-0.2
+0.7
-0.5
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.2
-0.1
+0.3
+0.1
-0.1
auxotrophy
YNB Glucose
+0.1
-0.0
-0.2
+0.3
-0.1
growth on ricinoleic acid
YNB Glucose
-0.0
-0.1
-0.0
+0.3
+0.0
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.1
-0.2
+0.1
+0.3
+0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.2
+0.0
-0.1
+0.6
-0.1
auxotrophy
YNB Glucose 75mM Methionine
+0.1
-0.1
-0.2
+0.3
+0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.0
-0.1
-0.1
+0.5
+0.2
auxotrophy
YNB Glucose 75mM Arginine
+0.3
-0.2
-0.4
+0.6
+0.3
growth on oleic acid
YNB Glucose
+0.4
-0.3
-0.0
+0.3
+0.2
growth on oleic acid
YNB Oleic Acid
+0.5
-0.1
-0.0
+0.4
-0.1
facs on lipid accumulation
Sorted No BODIPY Gate
+0.0
+0.2
+0.1
+0.5
+0.1
growth on ypd
YPD
+0.6
+0.3
+0.8
-0.3
-0.1
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